G1704302


Basic Information

Item Value
gene id G1704302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6923557 ~ 6924789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951278
gtgtgtgtgtgtgtgtgtgtgtgtttgatccgAATACAGGTTTACAGGTAGACTGTTTTGACCCTGTTTCTGCAGTGTTGAGTTGTGACACATGTAATATCATTTAAACTGCCATCCTCGTACAGCGCAGACTGGGCCTGATGTTATCCAGCCGTATACCTTAGAGATTTAATCCCACCGATGCCCTTAAATTAGCAATCCATAGTCCATATCAGCCAGCCGTCCTGTCCCAATCCGTTAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTATTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTAGAGTATTCTGCTAGCCGTCCTGTCCCAATCCGTTAGTATTCTGCCAGCCGTCCTGTCCCAATCCGTTAGTATTCTGCCAGCCGTCCTGTCCCAATCCGTTAGTATTCTGCCAGCCGTCCTGTCCCAATCCGTTAGTATTCTGCCAGCCGTCCTGTCCCAATCTGTTAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTATTCAACCAGCCGTCCTGTCCCAATCCGTTAGTAGAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTACTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTACTtctctctgtgtgtctgtgagagtggATTAAcgttatgtctgtgtgtggagaggCCTCCATCACCATACATTCctaaaggcaccctattccctacgtagtgcactactaaaAGTAGTGTACACTGGGATTTACTTTGACCAatagggctccggtcaaaagtagtgcactatataggggatagggtgccatttgggaccctgGCTTGATCTCCATCCATCCAGTACCTTTGGTTGAAATGTTCCTGCTAAAACAAAGCTGCCAAATTGGTTTGAAGCCGAAAGTTGTGTTTCTATGTATGTTGAACTGGTTTAAGTGTTTCAGTTTAAACCTCGTTCCCTTTAAAATGTTACACTGTGTTTTTATTGGAAAATGACAATTTGTTCAATTGTTAATATCTTCAGAAGATCGTAAGAGTTGTGGAATAAACTGAAAA
>TU1951279
gtgtgtgtgtgtgtgtgtgtgtgtttgatccgAATACAGGTTTACAGGTAGACTGTTTTGACCCTGTTTCTGCAGTGTTGAGTTGTGACACATGTAATATCATTTAAACTGCCATCCTCGTACAGCGCAGACTGGGCCTGATGTTATCCAGCCGTATACCTTAGAGATTTAATCCCACCGATGCCCTTAAATTAGCAATCCATAGTCCATATCAGCCAGCCGTCCTGTCCCAATCCGTTAGTATTCAGCCAGCTGTCCTGTCCCAATCCGTTGGTAGAGTATTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTAGAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTACTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCTGCCAGCCATCCTGTCCCAATCCGTTAGTAGAGTATTCTGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCTgcccatctctctgtgtgtctgtgagagtggATTAAcgttatgtctgtgtgtggagaggCCTCCATCACCATACATTCctaaaggcaccctattccctacgtagtgcactactaaaAGTAGTGTACACTGGGATTTACTTTGACCAatagggctccggtcaaaagtagtgcactatataggggatagggtgccatttgggaccctgGCTTGATCTCCATCCATCCAGTACCTTTGGTTGAAATGTTCCTGCTAAAACAAAGCTGCCAAATTGGTTTGAAGCCGAAAGTTGTGTTTCTATGTATGTTGAACTGGTTTAAGTGTTTCAGTTTAAACCTCGTTCCCTTTAAAATGTTACACTGTGTTTTTATTGGAAAATGACAATTTGTTCAATTGTTAATATCTTCAGAAGATCGTAAGAGTTGTGGAATAAACTGAAAA
>TU1951281
gtgtgtgtgtgtgtgtgtgtgtgtttgatccgAATACAGGTTTACAGGTAGACTGTTTTGACCCTGTTTCTGCAGTGTTGAGTTGTGACACATGTAATATCATTTAAACTGCCATCCTCGTACAGCGCAGACTGGGCCTGATGTTATCCAGCCGTATACCTTAGAGATTTAATCCCACCGATGCCCTTAAATTAGCAATCCATAGTCCATATCAGCCAGCCGTCCTGTCCCAATCCTAGAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTATTCAGCCAGCCATCCTGTCCCAATCCGTTAGTACTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCTGCCAGCCATCCTGTCCCAATCCGTTAGTAGAGTATTCTGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCAGCCAGCCGTCCTGTCCCAATCCGTTAGTACTCTgcccatctctctgtgtgtctgtgagagtggATTAAcgttatgtctgtgtgtggagaggCCTCCATCACCATACATTCctaaaggcaccctattccctacgtagtgcactactaaaAGTAGTGTACACTGGGATTTACTTTGACCAatagggctccggtcaaaagtagtgcactatataggggatagggtgccatttgggaccctgGCTTGATCTCCATCCATCCAGTACCTTTGGTTGAAATGTTCCTGCTAAAACAAAGCTGCCAAATTGGTTTGAAGCCGAAAGTTGTGTTTCTATGTATGTTGAACTGGTTTAAGTGTTTCAGTTTAAACCTCGTTCCCTTTAAAATGTTACACTGTGTTTTTATTGGAAAATGACAATTTGTTCAATTGTTAATATCTTCAGAAGATCGTAAGAGTTGTGGAATAAACTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951278 False 1084 lncRNA 0.46 3 6923557 6924789
TU1951279 False 964 lncRNA 0.46 2 6923557 6924789
TU1951281 True 888 lncRNA 0.45 2 6923557 6924789

Neighbor

gene id symbol gene type direction distance location
LOC118942845 LOC106590959 coding downstream 6021 6890523 ~ 6917536 (-)
LOC118942797 NA coding downstream 405211 6517888 ~ 6518853 (-)
LOC110499738 lmo3 coding downstream 734747 6067135 ~ 6188810 (-)
LOC118942843 NA coding downstream 971946 5950034 ~ 5963423 (-)
LOC118942841 NA coding downstream 1101267 5687945 ~ 5822290 (-)
LOC118942846 LOC105029310 coding upstream 124107 7048896 ~ 7050907 (-)
LOC118942847 LOC106593057 coding upstream 378816 7303605 ~ 7307397 (-)
LOC118942848 LOC106594098 coding upstream 455790 7379889 ~ 7384439 (-)
LOC118936572 LOC108250668 coding upstream 665739 7585971 ~ 7768303 (-)
LOC110516645 LOC106597241 coding upstream 912361 7837150 ~ 7899175 (-)
G1704316 NA non-coding downstream 17605 6905057 ~ 6905952 (-)
G1704303 NA non-coding downstream 43286 6878435 ~ 6880271 (-)
G1704301 NA non-coding downstream 45361 6877914 ~ 6878196 (-)
G1704299 NA non-coding downstream 49148 6873884 ~ 6874409 (-)
G1704293 NA non-coding downstream 64542 6858254 ~ 6859015 (-)
G1704325 NA non-coding upstream 9912 6934701 ~ 6935279 (-)
G1704328 NA non-coding upstream 13999 6938788 ~ 6939206 (-)
G1704330 NA non-coding upstream 22868 6947657 ~ 6947930 (-)
G1704337 NA non-coding upstream 56682 6981471 ~ 6981761 (-)
G1704305 NA non-coding upstream 118996 7043785 ~ 7044773 (-)
G1704098 NA other downstream 217712 6700898 ~ 6705845 (-)
G1703896 NA other downstream 580375 6342741 ~ 6343182 (-)
G1703878 NA other downstream 615337 6305553 ~ 6308220 (-)
G1703669 NA other downstream 927131 5984365 ~ 5996426 (-)
G1704410 NA other upstream 224776 7149565 ~ 7149979 (-)
G1704412 NA other upstream 231901 7156690 ~ 7157057 (-)
G1704702 NA other upstream 373136 7297925 ~ 7299086 (-)
G1704700 NA other upstream 374411 7299200 ~ 7301845 (-)
G1704726 NA other upstream 440758 7365547 ~ 7366140 (-)

Expression


Co-expression Network