G1704209


Basic Information

Item Value
gene id G1704209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6935297 ~ 6936184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951172
GCATGTAACCTCTAGCACGTATGTATTAATATACTAGAAGCTTCCGTTgttaactacatggatatatcagctagcccatggtaatactcctgtctaactacatggatatatcagctagcccatggtaatactcccgtctaactacatggatatatcagctagcccatggtaatactcccgtctaactacatggatatatcagctagcccatggtaatactcccgtctaactacatggatatatcagctagcccatggtaatactcctgtctTGAATAACACTGCAGTGAGGTATGTGTGTTGTGAATCTCTTTGACATGTtgttattggggcggcagggtagtctagtggttagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951172 True 356 lncRNA 0.42 3 6935297 6936184

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 55567 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 630976 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 682964 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 941507 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 948656 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 591343 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 625160 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 864482 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 867096 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 937431 7873615 ~ 7878590 (+)
G1704208 NA non-coding upstream 10 6934845 ~ 6935287 (+)
G1704203 NA non-coding upstream 10383 6924116 ~ 6924914 (+)
G1704195 NA non-coding upstream 24961 6909950 ~ 6910336 (+)
G1704194 NA non-coding upstream 25739 6909248 ~ 6909558 (+)
G1704168 NA non-coding upstream 26138 6850303 ~ 6909159 (+)
G1704212 NA non-coding downstream 4944 6941128 ~ 6941339 (+)
G1704219 NA non-coding downstream 41016 6977200 ~ 6977415 (+)
G1704221 NA non-coding downstream 43288 6979472 ~ 6979974 (+)
G1704222 NA non-coding downstream 46680 6982864 ~ 6983154 (+)
G1704226 NA non-coding downstream 60988 6997172 ~ 6997379 (+)
G1703953 NA other upstream 528524 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 940487 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1217596 5717199 ~ 5717701 (+)
G1704232 NA other downstream 70985 7007169 ~ 7007740 (+)
G1704409 NA other downstream 213216 7149400 ~ 7149993 (+)
G1704562 NA other downstream 721245 7657429 ~ 7657869 (+)
G1704651 NA other downstream 913376 7849560 ~ 7850120 (+)

Expression


Co-expression Network