G1704219


Basic Information

Item Value
gene id G1704219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6977200 ~ 6977415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951182
CGGCTgttagacaggacacacagccctctctggGAGACAGGCCACAGCCCTCTCTGGTTGACAggacacacagccctctctggtagacaggacacacagtccTCTCTGGTAGACAGGACACACGGCTGTTATACAggacacacagccctctctggtagacaggacacacagccctctctgttagacaggacacacagtcatctctggtagacagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951182 True 216 lncRNA 0.56 1 6977200 6977415

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 97470 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 672879 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 724867 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 983410 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 990559 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 550112 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 583929 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 823251 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 825865 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 896200 7873615 ~ 7878590 (+)
G1704212 NA non-coding upstream 35861 6941128 ~ 6941339 (+)
G1704178 NA non-coding upstream 39800 6881233 ~ 6937400 (+)
G1704209 NA non-coding upstream 41016 6935297 ~ 6936184 (+)
G1704208 NA non-coding upstream 41913 6934845 ~ 6935287 (+)
G1704203 NA non-coding upstream 52286 6924116 ~ 6924914 (+)
G1704221 NA non-coding downstream 2057 6979472 ~ 6979974 (+)
G1704222 NA non-coding downstream 5449 6982864 ~ 6983154 (+)
G1704226 NA non-coding downstream 19757 6997172 ~ 6997379 (+)
G1704228 NA non-coding downstream 23149 7000564 ~ 7000763 (+)
G1704231 NA non-coding downstream 28506 7005921 ~ 7006127 (+)
G1703953 NA other upstream 570427 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 982390 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1259499 5717199 ~ 5717701 (+)
G1704232 NA other downstream 29754 7007169 ~ 7007740 (+)
G1704409 NA other downstream 171985 7149400 ~ 7149993 (+)
G1704562 NA other downstream 680014 7657429 ~ 7657869 (+)
G1704651 NA other downstream 872145 7849560 ~ 7850120 (+)

Expression


Co-expression Network