G1704222


Basic Information

Item Value
gene id G1704222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6982864 ~ 6983154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951185
ctatatatacaggacaccccttcatccactatatatacaggacaccccttcatccactatatatacagcagtatgaggacaccccttcatccactatatatacagcagtatgaggacaccccttcatccactatatatacagcagtatgaggacaccccttcatccactatatatacagcagtatgaggacaccccttcatccactatatatacagcagtatgaggacacccctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951185 True 235 lncRNA 0.43 2 6982864 6983154

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 103134 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 678543 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 730531 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 989074 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 996223 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 544373 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 578190 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 817512 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 820126 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 890461 7873615 ~ 7878590 (+)
G1704221 NA non-coding upstream 2890 6979472 ~ 6979974 (+)
G1704219 NA non-coding upstream 5449 6977200 ~ 6977415 (+)
G1704212 NA non-coding upstream 41525 6941128 ~ 6941339 (+)
G1704209 NA non-coding upstream 46680 6935297 ~ 6936184 (+)
G1704208 NA non-coding upstream 47577 6934845 ~ 6935287 (+)
G1704226 NA non-coding downstream 14018 6997172 ~ 6997379 (+)
G1704228 NA non-coding downstream 17410 7000564 ~ 7000763 (+)
G1704231 NA non-coding downstream 22767 7005921 ~ 7006127 (+)
G1704236 NA non-coding downstream 39200 7022354 ~ 7025478 (+)
G1704353 NA non-coding downstream 69109 7052263 ~ 7052466 (+)
G1703953 NA other upstream 576091 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 988054 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1265163 5717199 ~ 5717701 (+)
G1704232 NA other downstream 24015 7007169 ~ 7007740 (+)
G1704409 NA other downstream 166246 7149400 ~ 7149993 (+)
G1704562 NA other downstream 674275 7657429 ~ 7657869 (+)
G1704651 NA other downstream 866406 7849560 ~ 7850120 (+)

Expression


Co-expression Network