G1704236


Basic Information

Item Value
gene id G1704236
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7022354 ~ 7025478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951199
gtgttagtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgtttttcaccagataggctgttttaggttttcgttacgttcatcacgttctttattttgtagtgtttgcattgattcgtgttttacgtttgtttcattaaaacatggatcgcaatctacacgctgcattttggtccgatccttgttctacctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951199 True 239 lncRNA 0.40 2 7022354 7025478

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 142624 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 718033 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 770021 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1028564 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1035713 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 502049 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 535866 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 775188 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 777802 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 848137 7873615 ~ 7878590 (+)
G1704231 NA non-coding upstream 16227 7005921 ~ 7006127 (+)
G1704228 NA non-coding upstream 21591 7000564 ~ 7000763 (+)
G1704226 NA non-coding upstream 24975 6997172 ~ 6997379 (+)
G1704222 NA non-coding upstream 39200 6982864 ~ 6983154 (+)
G1704221 NA non-coding upstream 42380 6979472 ~ 6979974 (+)
G1704353 NA non-coding downstream 26785 7052263 ~ 7052466 (+)
G1704354 NA non-coding downstream 38099 7063577 ~ 7063915 (+)
G1704374 NA non-coding downstream 58055 7083533 ~ 7083791 (+)
G1704408 NA non-coding downstream 114356 7139834 ~ 7146046 (+)
G1704411 NA non-coding downstream 130396 7155874 ~ 7156183 (+)
G1704232 NA other upstream 14614 7007169 ~ 7007740 (+)
G1703953 NA other upstream 615581 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 1027544 5983345 ~ 5994810 (+)
G1704409 NA other downstream 123922 7149400 ~ 7149993 (+)
G1704562 NA other downstream 631951 7657429 ~ 7657869 (+)
G1704651 NA other downstream 824082 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1513450 8538928 ~ 8564807 (+)

Expression


Co-expression Network