G1704419


Basic Information

Item Value
gene id G1704419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7239594 ~ 7239827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951419
GTGCTCACATCGTCCCTGGTTGTCGGTATTGACAAGCCACTTGTCTCCTAACACGTGCACCTGATTGGTGCTCACATCGTCCCTGGTTGCCAGTATTGACAAGCCACTTGTCTCCTAATACCTGCACCTGATTGGTGCTCACATCGTCCCTGGTTGTCGGTATTGACAAGCCACTTGTCTCCTAATACCTGCACCTGATTGGTGCTCACATTGTCCCTGGTTGTCAGTATTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951419 True 234 lncRNA 0.51 1 7239594 7239827

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 359864 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 935273 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 987261 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1245804 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1252953 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 287700 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 321517 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 560839 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 563453 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 633788 7873615 ~ 7878590 (+)
G1704415 NA non-coding upstream 7004 7232360 ~ 7232590 (+)
G1704414 NA non-coding upstream 19808 7219356 ~ 7219786 (+)
G1704413 NA non-coding upstream 72735 7166658 ~ 7166859 (+)
G1704411 NA non-coding upstream 83411 7155874 ~ 7156183 (+)
G1704408 NA non-coding upstream 93548 7139834 ~ 7146046 (+)
G1704420 NA non-coding downstream 736 7240563 ~ 7240867 (+)
G1704423 NA non-coding downstream 1742 7241569 ~ 7242363 (+)
G1704426 NA non-coding downstream 6957 7246784 ~ 7247141 (+)
G1704427 NA non-coding downstream 8932 7248759 ~ 7248982 (+)
G1704433 NA non-coding downstream 15703 7255530 ~ 7255741 (+)
G1704409 NA other upstream 89601 7149400 ~ 7149993 (+)
G1704232 NA other upstream 231854 7007169 ~ 7007740 (+)
G1703953 NA other upstream 832821 6406032 ~ 6406773 (+)
G1704562 NA other downstream 417602 7657429 ~ 7657869 (+)
G1704651 NA other downstream 609733 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1299101 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1610571 8850398 ~ 8851107 (+)

Expression


Co-expression Network