G1704420


Basic Information

Item Value
gene id G1704420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7240563 ~ 7240867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951420
aatagcccacccaatttacctacctcatccccaaactgtttttattttatttacttttctgctcttttgcacaccagtatctctacctgcacatcatcatctgctcatttatcactccagtgttaatctacaaaattgtaactattcgctcCTATGGTCTATTGAttccttacctcctcatgccttttgcacacaatgtatatagactttctttttttctactgtgtcattgacttgtttattgtttactccatgtgtaactctgtgttgttgtctgtgtcacactgctttgctttatcttggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951420 True 305 lncRNA 0.37 1 7240563 7240867

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 360833 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 936242 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 988230 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1246773 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1253922 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 286660 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 320477 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 559799 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 562413 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 632748 7873615 ~ 7878590 (+)
G1704419 NA non-coding upstream 736 7239594 ~ 7239827 (+)
G1704415 NA non-coding upstream 7973 7232360 ~ 7232590 (+)
G1704414 NA non-coding upstream 20777 7219356 ~ 7219786 (+)
G1704413 NA non-coding upstream 73704 7166658 ~ 7166859 (+)
G1704411 NA non-coding upstream 84380 7155874 ~ 7156183 (+)
G1704423 NA non-coding downstream 702 7241569 ~ 7242363 (+)
G1704426 NA non-coding downstream 5917 7246784 ~ 7247141 (+)
G1704427 NA non-coding downstream 7892 7248759 ~ 7248982 (+)
G1704433 NA non-coding downstream 14663 7255530 ~ 7255741 (+)
G1704434 NA non-coding downstream 15961 7256828 ~ 7257028 (+)
G1704409 NA other upstream 90570 7149400 ~ 7149993 (+)
G1704232 NA other upstream 232823 7007169 ~ 7007740 (+)
G1703953 NA other upstream 833790 6406032 ~ 6406773 (+)
G1704562 NA other downstream 416562 7657429 ~ 7657869 (+)
G1704651 NA other downstream 608693 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1298061 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1609531 8850398 ~ 8851107 (+)

Expression


Co-expression Network