G1704433


Basic Information

Item Value
gene id G1704433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7255530 ~ 7255741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951435
acgtctactctgtgatgttcaATAACTCCAtcagggaacgtctactctgtgatgtccagtaactccattagggaacgtctactctgtgatgttcagtaactccattagggaacgtctactctgtgatgagcagtaactccattagggaacgtctactctgtgatgtccagtaactccatgagggaacgtctactctgtgatgtctggtaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951435 True 212 lncRNA 0.45 1 7255530 7255741

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 375800 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 951209 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1003197 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1261740 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1268889 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 271786 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 305603 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 544925 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 547539 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 617874 7873615 ~ 7878590 (+)
G1704427 NA non-coding upstream 6548 7248759 ~ 7248982 (+)
G1704426 NA non-coding upstream 8389 7246784 ~ 7247141 (+)
G1704423 NA non-coding upstream 13167 7241569 ~ 7242363 (+)
G1704420 NA non-coding upstream 14663 7240563 ~ 7240867 (+)
G1704419 NA non-coding upstream 15703 7239594 ~ 7239827 (+)
G1704434 NA non-coding downstream 1087 7256828 ~ 7257028 (+)
G1704447 NA non-coding downstream 31251 7286992 ~ 7288160 (+)
G1704446 NA non-coding downstream 33383 7289124 ~ 7289402 (+)
G1704440 NA non-coding downstream 35356 7291097 ~ 7291795 (+)
G1704443 NA non-coding downstream 50236 7305977 ~ 7353237 (+)
G1704409 NA other upstream 105537 7149400 ~ 7149993 (+)
G1704232 NA other upstream 247790 7007169 ~ 7007740 (+)
G1703953 NA other upstream 848757 6406032 ~ 6406773 (+)
G1704562 NA other downstream 401688 7657429 ~ 7657869 (+)
G1704651 NA other downstream 593819 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1283187 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1594657 8850398 ~ 8851107 (+)

Expression


Co-expression Network