G1704697


Basic Information

Item Value
gene id G1704697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7354882 ~ 7355953 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951792
TTCTGTATAGATATGACATCAATAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGTATAGATATGACATCAAGAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGTATAGATATGACATCAATAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGGTACTAAAACATATTATTGAAAACATGTACAGCTGGTAAGCCAGAAATAAAGACAGACCGTAGTTTTAATTCTGTGTCAACAAACTGTTCTAAAAAATACCTATCTGTTCTTCTCGGCTCTGTTGAGACTCGTGGAGTTATTGCATTGTTAAATCTCTATTTTTTTAAGGtacgatatatatatatgttttatatgaAAAGGGATTGGTTTAAAACTGGACATTTTATTTGATAGATTTATAACATTCaattatgtttttaaaaaaaaaaatttttgatGTTGATAAAATGTTTTGCCTTGATGAGAACATGGCAGGCAGGTAGAGGGTGACGAAAACAAAATGGCTTCCTTTCAAAACAATCATGTTCCGTGTTCACGTGCTAATCGGAACTTGGAACTGTCCGACATGCTGACCGGTTGTGGTTATTAAACACGTTCAACCAGTTAGAAAGTCTGAATTTCCTAGTTTTCCGACTAGCAAGTGAACACGACATTAAACATCCCATTTTCCGGCGCAGGGATATGACGTCATCAGTATGAATCTGCTGCAGGGGTTTTGACGAATGTTCATatgtttatttgttatttttttaatcatttaaatgattgattgattgtttttgatCAGAATGCTGTATCACTGTTAATTGATCACTGTTAATTGATCACTGTTAATTGATCACTGTTAATTGATCACTGTTAATTGATTGAAGGCATCTACCTCAGTGTCCGCGTCACGTTTAGTTTTAAACAGCAGCTGTAACCTCTGGGTCGTGTTCCAAGGGAAGAAAACAGGGAGGTGACAACCTTgagttgtccaataagaaacactcattttcattttttttccccccatggCAAAACGGTTTGGTACGCGAGC
>TU1951791
TTCTGTATAGATATGACATCAATAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGTATAGATATGACATCAAGAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGTATAGATATGACATCAATAAGACGATGTTCTGTATGTAGACATCGAATCATATCATGTTCTGGTACTAAAACATATTATTGAAAACATGTACAGCTGGTAAGCCAGAAATAAAGACAGACCGTAGTTTTAATTCTGTGTCAACAAACTGTTCTAAAAAATACCTATCTGTTCTTCTCGGCTCTGTTGAGACTCGTGGAGTTATTGCATTGTTAAATCTCTATTTTTTTAAGGtacgatatatatatatgttttatatgaAAAGGGATTGGTTTAAAACTGGACATTTTATTTGATAGATTTATAACATTCaattatgtttttaaaaaaaaaaatttttgatGTTGATAAAATGTTTTGCCTTGATGAGAACATGGCAGGCAGGTAGAGGGTGACGAAAACAAAATGGCTTCCTTTCAAAACAATCATGTTCCGTGTTCACGTGCTAATCGGAACTTGGAACTGTCCGACATGCTGACCGGTTGTGGTTATTAAACACGTTCAACCAGTTAGAAAGTCTGAATTTCCTAGTTTTCCGACTAGCAAGTGAACACGACATTAAACATCCCATTTTCCGGCGCAGGGATATGACGTCATCAGTATGAATCTGCTGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951792 False 1072 lncRNA 0.35 1 7354882 7355953
TU1951791 True 744 lncRNA 0.35 1 7355210 7355953

Neighbor

gene id symbol gene type direction distance location
LOC118942847 LOC106593057 coding downstream 47485 7303605 ~ 7307397 (-)
LOC118942846 LOC105029310 coding downstream 303975 7048896 ~ 7050907 (-)
LOC118942845 LOC106590959 coding downstream 437346 6890523 ~ 6917536 (-)
LOC118942797 NA coding downstream 836536 6517888 ~ 6518853 (-)
LOC110499738 lmo3 coding downstream 1166072 6067135 ~ 6188810 (-)
LOC118942848 LOC106594098 coding upstream 24626 7379889 ~ 7384439 (-)
LOC118936572 LOC108250668 coding upstream 234575 7585971 ~ 7768303 (-)
LOC110516645 LOC106597241 coding upstream 481197 7837150 ~ 7899175 (-)
LOC118942852 NA coding upstream 532958 7888911 ~ 7890273 (-)
LOC110517214 LOC106599091 coding upstream 545759 7901712 ~ 7924740 (-)
G1704694 NA non-coding downstream 1640 7352262 ~ 7353242 (-)
G1704721 NA non-coding downstream 4371 7349545 ~ 7350511 (-)
G1704698 NA non-coding downstream 60326 7292093 ~ 7294556 (-)
G1704705 NA non-coding downstream 63119 7291175 ~ 7291763 (-)
G1704696 NA non-coding downstream 65146 7289121 ~ 7289736 (-)
G1704692 NA non-coding upstream 162 7356115 ~ 7359498 (-)
G1704722 NA non-coding upstream 5438 7361391 ~ 7364261 (-)
G1704729 NA non-coding upstream 20821 7376774 ~ 7377223 (-)
G1704733 NA non-coding upstream 36284 7392237 ~ 7398744 (-)
G1704700 NA other downstream 53037 7299200 ~ 7301845 (-)
G1704702 NA other downstream 55796 7297925 ~ 7299086 (-)
G1704412 NA other downstream 197825 7156690 ~ 7157057 (-)
G1704410 NA other downstream 204903 7149565 ~ 7149979 (-)
G1704098 NA other downstream 649037 6700898 ~ 6705845 (-)
G1704726 NA other upstream 9594 7365547 ~ 7366140 (-)
G1704927 NA other upstream 585196 7941149 ~ 7962240 (-)
LOC110515713 LOC106609844 other upstream 632748 7945498 ~ 8003041 (-)

Expression


Co-expression Network