G1704445


Basic Information

Item Value
gene id G1704445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7356106 ~ 7359490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951453
ATCAGTGGGTTTACACATGTCATTATTCATGTGTTGTGGAAGGTGATTCAAGTAACGTCTCCTgtacctctgtctgtttgtctcctctcctctctgcaggtcATCAGAGCAGTGAGGCTGTCTCCTGTCCATATCAGACAGATTGTTGTCCACCTGGTTTAAATATATTGTCtgtttgtctcctctcctctctgcaggtcATCAGATCAGTGCTGCTGTCTCCTGTCTATATCAGACAGATTGATGTCCACCTGGTTTGAATCTCTGTCAGTAATGTTGTCCACACAGTTAAATCTGTGTCAGACACATTGTCCATGTGgtgtattctgtatcctgtcagtgatgttgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctacatcctgtcagtgatgttgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctgtatcc
>TU1951452
tgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgcattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctgtatcctgtcagtgatgttgtccaggtgtattctacatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccatgtggtgtattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtcaggtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccatgtggtgtattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtcagtgatgttgtccaggtgtattctatatcctgtc

Function

NR:

description
PREDICTED: ribonuclease R-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951453 False 504 lncRNA 0.44 2 7356106 7358831
TU1951452 True 611 lncRNA 0.42 2 7358368 7359490

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 476376 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1051785 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1103773 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1362316 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1369465 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 168037 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 201854 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 441176 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 443790 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 514125 7873615 ~ 7878590 (+)
G1704442 NA non-coding upstream 158 7353900 ~ 7355948 (+)
G1704443 NA non-coding upstream 2869 7305977 ~ 7353237 (+)
G1704462 NA non-coding upstream 9700 7345223 ~ 7346406 (+)
G1704461 NA non-coding upstream 22439 7333320 ~ 7333667 (+)
G1704456 NA non-coding upstream 28750 7326483 ~ 7327356 (+)
G1704467 NA non-coding downstream 1684 7361174 ~ 7361387 (+)
G1704474 NA non-coding downstream 17662 7377152 ~ 7377382 (+)
G1704475 NA non-coding downstream 18587 7378077 ~ 7378303 (+)
G1704478 NA non-coding downstream 20367 7379857 ~ 7381471 (+)
G1704479 NA non-coding downstream 30407 7389897 ~ 7391229 (+)
G1704409 NA other upstream 206113 7149400 ~ 7149993 (+)
G1704232 NA other upstream 348366 7007169 ~ 7007740 (+)
G1703953 NA other upstream 949333 6406032 ~ 6406773 (+)
G1704562 NA other downstream 297939 7657429 ~ 7657869 (+)
G1704651 NA other downstream 490070 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1179438 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1490908 8850398 ~ 8851107 (+)

Expression


Co-expression Network