G1704692


Basic Information

Item Value
gene id G1704692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7356115 ~ 7359498 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951778
acatcactgacaggatatagaatacacctggacaacatcactgacaggatatagaatacacctggacaacatcactgacaggatatagaatacaccacatggacaacatcactgacaggatatagaatacacctggacaacatcacctgacaggatatagaatacacctggacaacatcactgacaggatatagaatacaccacatggacaaTGTGTCTGACACAGATTTAACTGTGTGGACAACATTACTGACAGAGATTCAAACCAGGTGGACATCAATCTGTCTGATATAGACAGGAGACAGCAGCACTGATCTGATgacctgcagagaggagaggagacaaacaGACAATATATTTAAACCAGGTGGACAACAATCTGTCTGATATGGACAGGAGACAGCCTCACTGCTCTGATgacctgcagagaggagaggagacaaacagacagaggtacAGGAGACGTTACTTGAATCACCTTCCACAACACATGAATAATGACATGTGTAAA
>TU1951779
acatcactgacaggatatagaatacacctggacaacatcactgacaggatatagaatacacctggacaacatcactgacaggatatagaatacaccacatggacaacatcactgacaggatatagaatacacctggacaacatcacctgacaggatatagaatacacctggacaacatcactgacaggatatagaatacaccacatggacaacatcactgacaggatatagaatacacctggacaacatcactgataggatatagaatacacCACATGGACAATGTGTCTGACACAGATTTAACTGTGTGGACAACATTACTGACAGAGATTCAAACCAGGTGGACATCAATCTGTCTGATATAGACAGGAGACAGCAGCACTGATCTGATgacctgcagagaggagaggagacaaacaGACAATATATTTAAACCAGGTGGACAACAATCTGTCTGATATGGACAGGAGACAGCCTCACTGCTCTGATgacctgcagagaggagaggagacaaacagacagaggtacAGGAGACGTTACTTGAATCACCTTCCACAACACATGAATAATGACATGTGTAAA
>TU1951780
cacctggacaacatcactgacaggatacagaatacacctggacaacatcactgacaggatgtagaatacacctggacaacatcactgacaggatacagaatacacCACATGGACAATGTGTCTGACACAGATTTAACTGTGTGGACAACATTACTGACAGAGATTCAAACCAGGTGGACATCAATCTGTCTGATATAGACAGGAGACAGCAGCACTGATCTGATgacctgcagagaggagaggagacaaacaGACAATATATTTAAACCAGGTGGACAACAATCTGTCTGATATGGACAGGAGACAGCCTCACTGCTCTGATgacctgcagagaggagaggagacaaacagacagaggtacAGGAGACGTTACTTGAATCACCTTCCACAACACATGAATAATGACATGTGTAAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951778 False 511 lncRNA 0.43 2 7356115 7359498
TU1951779 False 582 lncRNA 0.42 2 7356115 7359498
TU1951780 True 415 lncRNA 0.44 2 7356115 7358785

Neighbor

gene id symbol gene type direction distance location
LOC118942847 LOC106593057 coding downstream 48718 7303605 ~ 7307397 (-)
LOC118942846 LOC105029310 coding downstream 305208 7048896 ~ 7050907 (-)
LOC118942845 LOC106590959 coding downstream 438579 6890523 ~ 6917536 (-)
LOC118942797 NA coding downstream 837769 6517888 ~ 6518853 (-)
LOC110499738 lmo3 coding downstream 1167305 6067135 ~ 6188810 (-)
LOC118942848 LOC106594098 coding upstream 21081 7379889 ~ 7384439 (-)
LOC118936572 LOC108250668 coding upstream 231030 7585971 ~ 7768303 (-)
LOC110516645 LOC106597241 coding upstream 477652 7837150 ~ 7899175 (-)
LOC118942852 NA coding upstream 529413 7888911 ~ 7890273 (-)
LOC110517214 LOC106599091 coding upstream 542214 7901712 ~ 7924740 (-)
G1704697 NA non-coding downstream 162 7354882 ~ 7355953 (-)
G1704694 NA non-coding downstream 2873 7352262 ~ 7353242 (-)
G1704721 NA non-coding downstream 5604 7349545 ~ 7350511 (-)
G1704698 NA non-coding downstream 61559 7292093 ~ 7294556 (-)
G1704705 NA non-coding downstream 64352 7291175 ~ 7291763 (-)
G1704722 NA non-coding upstream 1893 7361391 ~ 7364261 (-)
G1704729 NA non-coding upstream 17276 7376774 ~ 7377223 (-)
G1704733 NA non-coding upstream 32739 7392237 ~ 7398744 (-)
G1704734 NA non-coding upstream 37679 7397177 ~ 7397506 (-)
G1704700 NA other downstream 54270 7299200 ~ 7301845 (-)
G1704702 NA other downstream 57029 7297925 ~ 7299086 (-)
G1704412 NA other downstream 199058 7156690 ~ 7157057 (-)
G1704410 NA other downstream 206136 7149565 ~ 7149979 (-)
G1704098 NA other downstream 650270 6700898 ~ 6705845 (-)
G1704726 NA other upstream 6049 7365547 ~ 7366140 (-)
G1704927 NA other upstream 581651 7941149 ~ 7962240 (-)
LOC110515713 LOC106609844 other upstream 629203 7945498 ~ 8003041 (-)

Expression


Co-expression Network