G1704475


Basic Information

Item Value
gene id G1704475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7378077 ~ 7378303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951489
CTATATCTGTAGGGAACTCACCACTGTATCCAGACAGATACTATATCTGTAGGGAACCCACCACTGTACCCAGACAGATACTATATCTGTAGGGAACCCACCACTGTATCCAGACAGATACTATATCTGTAGGGAATCCAGGGGAACCCACCACTGTATCCAGACAGATACTATATCTGTAGGGAACCCAGGGGAACCCACCACTGTACCCAGACAGATACTATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951489 True 227 lncRNA 0.47 1 7378077 7378303

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 498347 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1073756 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1125744 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1384287 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1391436 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 149224 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 183041 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 422363 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 424977 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 495312 7873615 ~ 7878590 (+)
G1704474 NA non-coding upstream 695 7377152 ~ 7377382 (+)
G1704467 NA non-coding upstream 16690 7361174 ~ 7361387 (+)
G1704445 NA non-coding upstream 18587 7356106 ~ 7359490 (+)
G1704442 NA non-coding upstream 22129 7353900 ~ 7355948 (+)
G1704462 NA non-coding upstream 31671 7345223 ~ 7346406 (+)
G1704478 NA non-coding downstream 1554 7379857 ~ 7381471 (+)
G1704479 NA non-coding downstream 11594 7389897 ~ 7391229 (+)
G1704486 NA non-coding downstream 26840 7405143 ~ 7405889 (+)
G1704500 NA non-coding downstream 83997 7462300 ~ 7463881 (+)
G1704502 NA non-coding downstream 88516 7466819 ~ 7471190 (+)
G1704409 NA other upstream 228084 7149400 ~ 7149993 (+)
G1704232 NA other upstream 370337 7007169 ~ 7007740 (+)
G1703953 NA other upstream 971304 6406032 ~ 6406773 (+)
G1704562 NA other downstream 279126 7657429 ~ 7657869 (+)
G1704651 NA other downstream 471257 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1160625 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1472095 8850398 ~ 8851107 (+)

Expression


Co-expression Network