Gene
RNA
| Item | Value |
|---|---|
| gene id | G1704733 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 7392237 ~ 7398744 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: Y' element ATP-dependent helicase YEL077C-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1951847 | False | 216 | lncRNA | 0.44 | 2 | 7392237 | 7392599 |
| TU1951848 | False | 200 | lncRNA | 0.42 | 2 | 7392237 | 7395816 |
| TU1951849 | True | 203 | lncRNA | 0.42 | 3 | 7392237 | 7398744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942848 | LOC106594098 | coding | downstream | 7798 | 7379889 ~ 7384439 (-) |
| LOC118942847 | LOC106593057 | coding | downstream | 84840 | 7303605 ~ 7307397 (-) |
| LOC118942846 | LOC105029310 | coding | downstream | 341330 | 7048896 ~ 7050907 (-) |
| LOC118942845 | LOC106590959 | coding | downstream | 474701 | 6890523 ~ 6917536 (-) |
| LOC118942797 | NA | coding | downstream | 873891 | 6517888 ~ 6518853 (-) |
| LOC118936572 | LOC108250668 | coding | upstream | 191784 | 7585971 ~ 7768303 (-) |
| LOC110516645 | LOC106597241 | coding | upstream | 438406 | 7837150 ~ 7899175 (-) |
| LOC118942852 | NA | coding | upstream | 490167 | 7888911 ~ 7890273 (-) |
| LOC110517214 | LOC106599091 | coding | upstream | 502968 | 7901712 ~ 7924740 (-) |
| LOC110515713 | LOC106609844 | coding | upstream | 546754 | 7945498 ~ 8003041 (-) |
| G1704729 | NA | non-coding | downstream | 15014 | 7376774 ~ 7377223 (-) |
| G1704722 | NA | non-coding | downstream | 27976 | 7361391 ~ 7364261 (-) |
| G1704692 | NA | non-coding | downstream | 32739 | 7356115 ~ 7359498 (-) |
| G1704697 | NA | non-coding | downstream | 36284 | 7354882 ~ 7355953 (-) |
| G1704739 | NA | non-coding | upstream | 8354 | 7407098 ~ 7407954 (-) |
| G1704747 | NA | non-coding | upstream | 33006 | 7431750 ~ 7432166 (-) |
| G1704756 | NA | non-coding | upstream | 66339 | 7465083 ~ 7465717 (-) |
| G1704759 | NA | non-coding | upstream | 69806 | 7468550 ~ 7469306 (-) |
| G1704765 | NA | non-coding | upstream | 84381 | 7483125 ~ 7483514 (-) |
| G1704726 | NA | other | downstream | 26097 | 7365547 ~ 7366140 (-) |
| G1704700 | NA | other | downstream | 90392 | 7299200 ~ 7301845 (-) |
| G1704702 | NA | other | downstream | 93151 | 7297925 ~ 7299086 (-) |
| G1704412 | NA | other | downstream | 235180 | 7156690 ~ 7157057 (-) |
| G1704927 | NA | other | upstream | 542405 | 7941149 ~ 7962240 (-) |
| pthlha | NA | other | upstream | 627545 | 8024974 ~ 8047016 (-) |
| G1705386 | NA | other | upstream | 1132991 | 8531735 ~ 8532803 (-) |
