G1704502


Basic Information

Item Value
gene id G1704502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7466819 ~ 7471190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951535
ctgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgaattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcaatgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactgcacctgttgtattcagcatttcactgtgaggtctactgcaccagttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactgcacctgttgtattcagcatttcactgtgagttctactgcacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatgtcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtgttcagcatttcactgtaaggtctactacacctgttgtattcagcatttcaatgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtacggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggactactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtaatcagcatttcactgtaaggtctactacacctgttgtattcagcatttcaatgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtacggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggactactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtaatcagcatttcactgtaaggtctactgcacctgttgtattcatcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtacggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgtggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtaatcagcatttcactgtaaggtctactacacttgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcgtttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcgtttcactgtaaggtctactacacctgttgtattcggcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgagttctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactctggctctggtttaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaataggaccctggtcaatagtagtgcactatatagggaatggggctctggtctatagtagtaccactatatagggaatagggctctggtctatagtagtgcactatataaggaatggggctctggtctaaagtagtgcactatattgggaatagggctctggtctatagtagtgcactacatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctatagtagtgtactatatagggaatagggctctggtctaaagtagtgtactatatagggaatagggccctggtcaatagtagtgcactatatagggaatggggctctggtctatagtagtaccactatatagggaatagggctctggtctatagtagtgcactatattgggaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctatagtagtgcactatatagggaataggcctctggtctaaagtagtgcactatatagggaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctatagtagtgtactatatagggaatagggctctggtctattgtagtgcactatatagggaatagggagccattgggGACGTAACCATAGAGCCTTAGTAGTACACCAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562210, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951535 True 3764 lncRNA 0.42 2 7466819 7471190

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 587089 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1162498 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1214486 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1473029 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1480178 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 56337 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 90154 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 329476 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 332090 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 402425 7873615 ~ 7878590 (+)
G1704500 NA non-coding upstream 2938 7462300 ~ 7463881 (+)
G1704486 NA non-coding upstream 60930 7405143 ~ 7405889 (+)
G1704479 NA non-coding upstream 75590 7389897 ~ 7391229 (+)
G1704478 NA non-coding upstream 85348 7379857 ~ 7381471 (+)
G1704475 NA non-coding upstream 88516 7378077 ~ 7378303 (+)
G1704535 NA non-coding downstream 87116 7558306 ~ 7558770 (+)
G1704539 NA non-coding downstream 124748 7595938 ~ 7600472 (+)
G1704542 NA non-coding downstream 129750 7600940 ~ 7601789 (+)
G1704409 NA other upstream 316826 7149400 ~ 7149993 (+)
G1704232 NA other upstream 459079 7007169 ~ 7007740 (+)
G1703953 NA other upstream 1060046 6406032 ~ 6406773 (+)
G1704562 NA other downstream 186239 7657429 ~ 7657869 (+)
G1704651 NA other downstream 378370 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 1067738 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1379208 8850398 ~ 8851107 (+)

Expression


Co-expression Network