G1704535


Basic Information

Item Value
gene id G1704535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7558306 ~ 7558770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951587
CGGCAACACACAACACTGCACGGCAACACACAACCACATGACACAACACCGCACAACCCCTCAGAACACCGCACAGCAACACACAACAACATAGTGCTGAAGTACCGCTCTGCTTCCTGCTCATGATCAGAACCACATTAAAACACCATTATCCTTCTATCATGTTCAACAGGCTGTACGGCTGATGTTCTGTctccacaacacaactgaactgatgttCTGGctccacaacacaactgatgttCTTTGctccacaacacaactgatgttCTGtctccacaacacaacacaactgatgttCTGtctccacaacacaacacaactgatgttCTGtctccacaacacaacacaactgatgttCTGTctccac

Function

NR:

description
PREDICTED: salivary glue protein Sgs-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951587 True 370 lncRNA 0.47 2 7558306 7558770

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 678576 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1253985 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1305973 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 1564516 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 1571665 5979351 ~ 5986641 (+)
LOC118942991 NA coding downstream 2574 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 241896 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 244510 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 314845 7873615 ~ 7878590 (+)
LOC118942851 NA coding downstream 323479 7882249 ~ 7883321 (+)
G1704502 NA non-coding upstream 87116 7466819 ~ 7471190 (+)
G1704500 NA non-coding upstream 94425 7462300 ~ 7463881 (+)
G1704486 NA non-coding upstream 152417 7405143 ~ 7405889 (+)
G1704479 NA non-coding upstream 167077 7389897 ~ 7391229 (+)
G1704478 NA non-coding upstream 176835 7379857 ~ 7381471 (+)
G1704539 NA non-coding downstream 37168 7595938 ~ 7600472 (+)
G1704542 NA non-coding downstream 42170 7600940 ~ 7601789 (+)
G1704543 NA non-coding downstream 43513 7602283 ~ 7602753 (+)
G1704549 NA non-coding downstream 103556 7662326 ~ 7704714 (+)
LOC118942849 arhgap8 other upstream 12462 7527527 ~ 7561975 (+)
G1704409 NA other upstream 408313 7149400 ~ 7149993 (+)
G1704232 NA other upstream 550566 7007169 ~ 7007740 (+)
G1703953 NA other upstream 1151533 6406032 ~ 6406773 (+)
G1704562 NA other downstream 98659 7657429 ~ 7657869 (+)
G1704651 NA other downstream 290790 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 980158 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1291628 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 1349746 8908286 ~ 9091490 (+)

Expression


Co-expression Network