G1704549


Basic Information

Item Value
gene id G1704549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7662326 ~ 7704714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951607
agagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagggggagagagagagagagacagagacagagagacagagagagagagattgaaagagagagagagagagagagagacagagagacagagacagagagacagaaagagagagagagagagactaggagcaGCATGTATTCTAAAAGGTTCACTTCATTATCCACACAGGCCCTAGTTATCCACTGTATTGAATGATTACATGTGTCATCACCACAGCCTTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951607 True 308 lncRNA 0.47 3 7662326 7704714

Neighbor

gene id symbol gene type direction distance location
LOC118942991 NA coding upstream 87568 7561344 ~ 7574758 (+)
LOC118942849 arhgap8 coding upstream 100351 7527527 ~ 7561975 (+)
LOC118942844 large1 coding upstream 782596 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1358005 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1409993 6228081 ~ 6252333 (+)
LOC110510398 LOC106591976 coding downstream 95952 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 98566 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 168901 7873615 ~ 7878590 (+)
LOC118942851 NA coding downstream 177535 7882249 ~ 7883321 (+)
yt6j yt6j coding downstream 220302 7925016 ~ 7943584 (+)
G1704543 NA non-coding upstream 59573 7602283 ~ 7602753 (+)
G1704542 NA non-coding upstream 60537 7600940 ~ 7601789 (+)
G1704539 NA non-coding upstream 61854 7595938 ~ 7600472 (+)
G1704598 NA non-coding downstream 39699 7744413 ~ 7744889 (+)
G1704623 NA non-coding downstream 80915 7785629 ~ 7785986 (+)
G1704627 NA non-coding downstream 88364 7793078 ~ 7793304 (+)
G1704629 NA non-coding downstream 92394 7797108 ~ 7797573 (+)
G1704645 NA non-coding downstream 113315 7818029 ~ 7818399 (+)
G1704562 NA other upstream 4457 7657429 ~ 7657869 (+)
G1704409 NA other upstream 512333 7149400 ~ 7149993 (+)
G1704232 NA other upstream 654586 7007169 ~ 7007740 (+)
G1704651 NA other downstream 144846 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 834214 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1145684 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 1203802 8908286 ~ 9091490 (+)
G1705267 NA other downstream 1270590 8975304 ~ 8976565 (+)

Expression


Co-expression Network