Gene
RNA
| Item | Value |
|---|---|
| gene id | G1704887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 7802012 ~ 7803351 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nuclear pore complex protein Nup50 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952052 | True | 317 | lncRNA | 0.48 | 2 | 7802012 | 7803351 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936572 | LOC108250668 | coding | downstream | 33709 | 7585971 ~ 7768303 (-) |
| LOC118942848 | LOC106594098 | coding | downstream | 417573 | 7379889 ~ 7384439 (-) |
| LOC118942847 | LOC106593057 | coding | downstream | 494615 | 7303605 ~ 7307397 (-) |
| LOC118942846 | LOC105029310 | coding | downstream | 751105 | 7048896 ~ 7050907 (-) |
| LOC118942845 | LOC106590959 | coding | downstream | 884476 | 6890523 ~ 6917536 (-) |
| LOC110516645 | LOC106597241 | coding | upstream | 33799 | 7837150 ~ 7899175 (-) |
| LOC118942852 | NA | coding | upstream | 85560 | 7888911 ~ 7890273 (-) |
| LOC110517214 | LOC106599091 | coding | upstream | 98361 | 7901712 ~ 7924740 (-) |
| LOC110515713 | LOC106609844 | coding | upstream | 142147 | 7945498 ~ 8003041 (-) |
| pthlha | NA | coding | upstream | 221623 | 8024974 ~ 8047016 (-) |
| G1704881 | NA | non-coding | downstream | 14094 | 7786805 ~ 7787918 (-) |
| G1704880 | NA | non-coding | downstream | 15344 | 7786317 ~ 7786668 (-) |
| G1704879 | NA | non-coding | downstream | 16012 | 7785720 ~ 7786000 (-) |
| G1704854 | NA | non-coding | downstream | 55617 | 7746091 ~ 7746395 (-) |
| G1704829 | NA | non-coding | downstream | 120563 | 7681144 ~ 7681449 (-) |
| G1704889 | NA | non-coding | upstream | 818 | 7804169 ~ 7805939 (-) |
| G1704899 | NA | non-coding | upstream | 15464 | 7818815 ~ 7819853 (-) |
| G1704900 | NA | non-coding | upstream | 16739 | 7820090 ~ 7822403 (-) |
| G1704905 | NA | non-coding | upstream | 48299 | 7851650 ~ 7852136 (-) |
| G1704726 | NA | other | downstream | 435872 | 7365547 ~ 7366140 (-) |
| G1704700 | NA | other | downstream | 500167 | 7299200 ~ 7301845 (-) |
| G1704702 | NA | other | downstream | 502926 | 7297925 ~ 7299086 (-) |
| G1704927 | NA | other | upstream | 137798 | 7941149 ~ 7962240 (-) |
| G1705386 | NA | other | upstream | 728384 | 8531735 ~ 8532803 (-) |
| LOC118942856 | crbl2 | other | upstream | 1003558 | 8805889 ~ 8808961 (-) |
