G1704921


Basic Information

Item Value
gene id G1704921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7894938 ~ 7896127 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952097
AACAGAAACGTTGCACAATTCCAGGTCGGTCCCTCGACGTTTCAGCACCTCTGTTTCCGTTTGCCTCCTAGTGGTTACACGCCACGCTCGTCAACGGGCCTTTAGTTGGCGATGAGGCAcgaggggggtgtggtatatggccgatataccacggctaagggctgttcttaggcacatcCATGTAGTGCTGTTCAAGATAACACATTCCTGTAAAAATGAGCCTTTTGTAATGAGCAGCAGGTGTGTTCTACTGTCAGTTCTGTGAATCCTGCGGGTacagtatttttttaatttaacattttatttaactaggcaagtcagttaagaacaaattcttatttacaatgacggcctaccgggggaacagtgggtcaactgccttgttcagggggcagaacgacagatttttaccttgtcaactcggggattcgatcgattcagcaacctttcgggttactggcccaactctctaaccactaggttacctgcctcccccctgtaTGACCATCTAAATATAGTCTCTGGTATCCCAATGTGGACTGAAGACCGGATTATCTCTCTCTGAGTGTCAAGGTGAATGTGAACGCAACATCTAGGCTCGTCTACAAAAAGTCCTTGGTTCAACAGCGTAATCTGAGGGAGAACCTCAGAACACTAATCTGCATTCTACACTAGAAACGTGGTGATTTTGCCAAGCGTTTGTTTGTCTCTCAGTAGTGGTATTGTTCTGTCAGGGACGTGTCATCTGTATTCCGTTCTCAGCATGACGTCGCCGCAGAGCGCTGGGCCTCGTGTCAATATGATGTCACCACAGAGCGCTGGGTCTCCTTGTGTCAatgtctttctctcgttctcgATCTGTCTTTCTCTGAGGCATTTTACACATCTAATCAATAGCTCTGTTACTGTTATCACTGAAGGATTAGGATGGATGGACATTTTAAAATATAATGACTAGTTGAACGGCAGCATGAATAGCCAGTGTCCGGGACAAGGTACCACGTCTGGTGAACTGGTCAAGGCTcggtagccgcaggcagaacagcagagactggatcagcagcacgaccaggtggactggagactgggtacagccaggagtcatcagaccaggtaGTCATGAGAGagggtcttagggctcaggtccgtctgaaggggagagggagagagatgggagaattagaggtcat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952097 True 1190 lncRNA 0.48 1 7894938 7896127

Neighbor

gene id symbol gene type direction distance location
LOC118942852 NA coding downstream 4665 7888911 ~ 7890273 (-)
LOC118936572 LOC108250668 coding downstream 126635 7585971 ~ 7768303 (-)
LOC118942848 LOC106594098 coding downstream 510499 7379889 ~ 7384439 (-)
LOC118942847 LOC106593057 coding downstream 587541 7303605 ~ 7307397 (-)
LOC118942846 LOC105029310 coding downstream 844031 7048896 ~ 7050907 (-)
LOC110517214 LOC106599091 coding upstream 5585 7901712 ~ 7924740 (-)
LOC110515713 LOC106609844 coding upstream 49371 7945498 ~ 8003041 (-)
pthlha NA coding upstream 128847 8024974 ~ 8047016 (-)
LOC118942993 NA coding upstream 291207 8187334 ~ 8188387 (-)
LOC118942856 crbl2 coding upstream 910319 8805889 ~ 8808961 (-)
G1704920 NA non-coding downstream 250 7894421 ~ 7894688 (-)
G1704919 NA non-coding downstream 624 7893991 ~ 7894314 (-)
G1704918 NA non-coding downstream 2318 7890872 ~ 7892620 (-)
G1704917 NA non-coding downstream 22281 7872457 ~ 7872657 (-)
G1704916 NA non-coding downstream 23125 7871524 ~ 7871813 (-)
G1704922 NA non-coding upstream 3519 7899646 ~ 7900224 (-)
G1704923 NA non-coding upstream 5099 7901226 ~ 7962861 (-)
G1704924 NA non-coding upstream 7929 7904056 ~ 7904596 (-)
G1704926 NA non-coding upstream 37230 7933357 ~ 7934313 (-)
G1704930 NA non-coding upstream 64180 7960307 ~ 7960992 (-)
G1704726 NA other downstream 528798 7365547 ~ 7366140 (-)
G1704700 NA other downstream 593093 7299200 ~ 7301845 (-)
G1704702 NA other downstream 595852 7297925 ~ 7299086 (-)
G1704927 NA other upstream 45022 7941149 ~ 7962240 (-)
G1705386 NA other upstream 635608 8531735 ~ 8532803 (-)

Expression


Co-expression Network