Gene
RNA
| Item | Value |
|---|---|
| gene id | G1704938 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 7983520 ~ 7984053 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106575597 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952119 | False | 248 | lncRNA | 0.42 | 2 | 7983520 | 7983812 |
| TU1952120 | True | 263 | lncRNA | 0.42 | 2 | 7983520 | 7984053 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517214 | LOC106599091 | coding | downstream | 58780 | 7901712 ~ 7924740 (-) |
| LOC110516645 | LOC106597241 | coding | downstream | 84345 | 7837150 ~ 7899175 (-) |
| LOC118942852 | NA | coding | downstream | 93247 | 7888911 ~ 7890273 (-) |
| LOC118936572 | LOC108250668 | coding | downstream | 215217 | 7585971 ~ 7768303 (-) |
| LOC118942848 | LOC106594098 | coding | downstream | 599081 | 7379889 ~ 7384439 (-) |
| pthlha | NA | coding | upstream | 40921 | 8024974 ~ 8047016 (-) |
| LOC118942993 | NA | coding | upstream | 203281 | 8187334 ~ 8188387 (-) |
| LOC118942856 | crbl2 | coding | upstream | 822393 | 8805889 ~ 8808961 (-) |
| LOC118942860 | NA | coding | upstream | 953090 | 8937143 ~ 8938405 (-) |
| LOC118942862 | NA | coding | upstream | 1006678 | 8990530 ~ 8991221 (-) |
| G1704933 | NA | non-coding | downstream | 15787 | 7963498 ~ 7967733 (-) |
| G1704934 | NA | non-coding | downstream | 15998 | 7963849 ~ 7967522 (-) |
| G1704923 | NA | non-coding | downstream | 20659 | 7901226 ~ 7962861 (-) |
| G1704930 | NA | non-coding | downstream | 22528 | 7960307 ~ 7960992 (-) |
| G1704926 | NA | non-coding | downstream | 49207 | 7933357 ~ 7934313 (-) |
| G1704940 | NA | non-coding | upstream | 3724 | 7987777 ~ 7988055 (-) |
| G1704909 | LOC100136354 | non-coding | upstream | 19402 | 8003455 ~ 8009523 (-) |
| G1704947 | NA | non-coding | upstream | 27203 | 8011256 ~ 8011649 (-) |
| G1704949 | NA | non-coding | upstream | 32565 | 8016618 ~ 8017608 (-) |
| G1704927 | NA | other | downstream | 21280 | 7941149 ~ 7962240 (-) |
| G1704726 | NA | other | downstream | 617380 | 7365547 ~ 7366140 (-) |
| G1704700 | NA | other | downstream | 681675 | 7299200 ~ 7301845 (-) |
| LOC110515713 | LOC106609844 | other | upstream | 4648 | 7945498 ~ 8003041 (-) |
| G1705386 | NA | other | upstream | 547682 | 8531735 ~ 8532803 (-) |
| LOC118942864 | NA | other | upstream | 1118365 | 9100061 ~ 9104616 (-) |
