G1704945


Basic Information

Item Value
gene id G1704945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8010148 ~ 8010428 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952127
TTTCGTTAAAGGTTAAATACCTGGCAAAGCTTCAGGTAAGTTTGGTGACCGTAAATTCGATAAAGTGAGCAGGAAAATGTAGTCTCAATTCGGTAAAATGAGCGAGGCAAGTTATTCTCCATTGAAATTGTGTTAAACTTCACGTGGGACGCTTTCATGTCTTCCATTCGCGGATGAGACTAAATCTgaggtaaatattttttttgctcaACTCAATAGACCTTAAGTCCAATGTCACATCACACGTTATGTCCGGTGTCAGTTTTGTTCCATTCTAACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952127 True 281 lncRNA 0.39 1 8010148 8010428

Neighbor

gene id symbol gene type direction distance location
LOC118942853 LOC106593275 coding upstream 680 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 5723 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 66564 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 126827 7882249 ~ 7883321 (+)
LOC118936573 LOC105026518 coding upstream 131558 7873615 ~ 7878590 (+)
LOC118942992 NA coding downstream 118057 8128485 ~ 8132838 (+)
LOC118942854 NA coding downstream 514528 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 544013 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 558962 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 674491 8684919 ~ 8744666 (+)
G1704683 NA non-coding upstream 21695 7988211 ~ 7988453 (+)
G1704675 NA non-coding upstream 33431 7975766 ~ 7976717 (+)
G1704671 NA non-coding upstream 38370 7971319 ~ 7971778 (+)
G1704659 NA non-coding upstream 81320 7928449 ~ 7928828 (+)
G1704946 NA non-coding downstream 1196 8011624 ~ 8012083 (+)
G1704950 NA non-coding downstream 7753 8018181 ~ 8018431 (+)
G1704956 NA non-coding downstream 14595 8025023 ~ 8025554 (+)
G1704965 NA non-coding downstream 51223 8061651 ~ 8062031 (+)
G1704966 NA non-coding downstream 58768 8069196 ~ 8069459 (+)
G1704651 NA other upstream 160028 7849560 ~ 7850120 (+)
G1704562 NA other upstream 352279 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 464304 7527527 ~ 7561975 (+)
G1704409 NA other upstream 860155 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1002408 7007169 ~ 7007740 (+)
G1705229 NA other downstream 839970 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 898088 8908286 ~ 9091490 (+)
G1705267 NA other downstream 964876 8975304 ~ 8976565 (+)
G1705279 NA other downstream 1001498 9011926 ~ 9013163 (+)

Expression


Co-expression Network