G1704996


Basic Information

Item Value
gene id G1704996
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8099845 ~ 8100276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952191
cctatgggccctggtctaaagtagtgcactacccctatgggccctagtctaaagtagtgcactacccctatgggccctggtctaaagtagtgcactacccctatgggctctcatctaaagtagtgcactacccctatgggccctggtctaaagtagtgcactacccctatgggccctggtctaaagtagtgcactacccctatgggacctggtctaaagtagtgcactacccctatgggccctggtctaaagtagtgcactacccctatggcccctggtctaaagtagtgcactacccctatgggtcctggtctaaagtagtgcactacccctatgggccctggtctaaagtagtgcactacccctatggcccctggtctaaagtagtgcactacccctatgggtcctagtctaaagtagtgcactacccct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106596100

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952191 True 432 lncRNA 0.53 1 8099845 8100276

Neighbor

gene id symbol gene type direction distance location
LOC118942853 LOC106593275 coding upstream 90377 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 95420 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 156261 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 216524 7882249 ~ 7883321 (+)
LOC118936573 LOC105026518 coding upstream 221255 7873615 ~ 7878590 (+)
LOC118942992 NA coding downstream 28209 8128485 ~ 8132838 (+)
LOC118942854 NA coding downstream 424680 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 454165 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 469114 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 584643 8684919 ~ 8744666 (+)
G1704966 NA non-coding upstream 30386 8069196 ~ 8069459 (+)
G1704965 NA non-coding upstream 37814 8061651 ~ 8062031 (+)
G1704956 NA non-coding upstream 74291 8025023 ~ 8025554 (+)
G1704950 NA non-coding upstream 81414 8018181 ~ 8018431 (+)
G1704946 NA non-coding upstream 87762 8011624 ~ 8012083 (+)
G1705020 NA non-coding downstream 45979 8146255 ~ 8146467 (+)
G1705023 NA non-coding downstream 49175 8149451 ~ 8149669 (+)
G1705031 NA non-coding downstream 63285 8163561 ~ 8164117 (+)
G1705034 NA non-coding downstream 82629 8182905 ~ 8183281 (+)
G1705035 NA non-coding downstream 85285 8185561 ~ 8185903 (+)
G1704651 NA other upstream 249725 7849560 ~ 7850120 (+)
G1704562 NA other upstream 441976 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 554001 7527527 ~ 7561975 (+)
G1704409 NA other upstream 949852 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1092105 7007169 ~ 7007740 (+)
G1705229 NA other downstream 750122 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 808240 8908286 ~ 9091490 (+)
G1705267 NA other downstream 875028 8975304 ~ 8976565 (+)
G1705279 NA other downstream 911650 9011926 ~ 9013163 (+)

Expression


Co-expression Network