G1705035


Basic Information

Item Value
gene id G1705035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8185561 ~ 8185903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952244
GTAATAGACTATATCCACCCTGTGGTGTAATAGACTATATCCACCCTGTGGTGTATAaagactacagtatatccaccctGTGGTGTAATAGACTATATCCACCCTGTGGTGTAATAGACTATATCCACCCTGTGGTGTAATAGACTATATCCACCCTGTGGTGTAATAGACTATATCTACCCTGTGGTGTAATAGACTATATCCACCCTGTGGTGTAATAGACTATATCCACCATGTGGTGTAATAGACTATATCCTCCCTGTGGTGTATAaagactacagtatatccaccctGTGGTGTAATAGACTATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952244 True 312 lncRNA 0.40 2 8185561 8185903

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 52723 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 176093 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 181136 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 241977 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 302240 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 339053 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 368538 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 383487 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 499016 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 584984 8770887 ~ 8791070 (+)
G1705034 NA non-coding upstream 2280 8182905 ~ 8183281 (+)
G1705031 NA non-coding upstream 21444 8163561 ~ 8164117 (+)
G1705023 NA non-coding upstream 35892 8149451 ~ 8149669 (+)
G1705020 NA non-coding upstream 39094 8146255 ~ 8146467 (+)
G1704996 NA non-coding upstream 85285 8099845 ~ 8100276 (+)
G1705043 NA non-coding downstream 5825 8191728 ~ 8191984 (+)
G1705044 NA non-coding downstream 7926 8193829 ~ 8238691 (+)
G1705080 NA non-coding downstream 117930 8303833 ~ 8304097 (+)
G1705084 NA non-coding downstream 119127 8305030 ~ 8305478 (+)
G1705087 NA non-coding downstream 122782 8308685 ~ 8309388 (+)
G1704651 NA other upstream 335441 7849560 ~ 7850120 (+)
G1704562 NA other upstream 527692 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 639717 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1035568 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1177821 7007169 ~ 7007740 (+)
G1705229 NA other downstream 664495 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 722613 8908286 ~ 9091490 (+)
G1705267 NA other downstream 789401 8975304 ~ 8976565 (+)
G1705279 NA other downstream 826023 9011926 ~ 9013163 (+)

Expression


Co-expression Network