G1705044


Basic Information

Item Value
gene id G1705044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8193829 ~ 8238691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952254
GCAGAGTGGAGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGTTAACAGTATTAGACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGTTAACAGTATTAGACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACGGTATTAGACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACGGTATTAGACTGTATTAGACTGAGTGGggataacaaacacacacacacacacacacacacacacacacacacacacacacacacacac
>TU1952259
GCAGAGTGGAGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGTTAACAGTATTAGACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGTTAACAGTATTAGACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACGGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACGGTATTAGACTGTATTAGACTGAGTGGggataacaaacacacacacacacacacacacacacacacacacacacacacacacacacac
>TU1952258
GGGATAACGGTATTAGAATGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTGTTAGACTGAGTGGGGATAACTGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACAGTATTAGACTGAGTGGGGATAACGGTATTAGACTGTATTAGACTGAGTGGggataaca

Function

NR:

description
stromal membrane-associated protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952254 False 446 lncRNA 0.42 3 8193829 8238691
TU1952259 False 436 lncRNA 0.42 3 8193829 8238691
TU1952258 True 283 lncRNA 0.42 3 8237594 8238296

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 60991 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 184361 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 189404 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 250245 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 310508 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 286265 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 315750 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 330699 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 446228 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 532196 8770887 ~ 8791070 (+)
G1705043 NA non-coding upstream 1845 8191728 ~ 8191984 (+)
G1705035 NA non-coding upstream 7926 8185561 ~ 8185903 (+)
G1705034 NA non-coding upstream 10548 8182905 ~ 8183281 (+)
G1705031 NA non-coding upstream 29712 8163561 ~ 8164117 (+)
G1705023 NA non-coding upstream 44160 8149451 ~ 8149669 (+)
G1705080 NA non-coding downstream 65142 8303833 ~ 8304097 (+)
G1705084 NA non-coding downstream 66339 8305030 ~ 8305478 (+)
G1705087 NA non-coding downstream 69994 8308685 ~ 8309388 (+)
G1705097 NA non-coding downstream 96993 8335684 ~ 8596863 (+)
G1705098 NA non-coding downstream 111447 8350138 ~ 8352924 (+)
G1704651 NA other upstream 343709 7849560 ~ 7850120 (+)
G1704562 NA other upstream 535960 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 647985 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1043836 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1186089 7007169 ~ 7007740 (+)
G1705229 NA other downstream 611707 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 669825 8908286 ~ 9091490 (+)
G1705267 NA other downstream 736613 8975304 ~ 8976565 (+)
G1705279 NA other downstream 773235 9011926 ~ 9013163 (+)

Expression


Co-expression Network