G1705080


Basic Information

Item Value
gene id G1705080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8303833 ~ 8304097 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952314
cagctcatcaccctgaacacaccatccccactgtcaaacatagtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaaaaaaacaatggaatggttcaaaaataaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952314 True 265 lncRNA 0.44 1 8303833 8304097

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 170995 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 294365 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 299408 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 360249 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 420512 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 220859 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 250344 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 265293 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 380822 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 466790 8770887 ~ 8791070 (+)
G1705044 NA non-coding upstream 65142 8193829 ~ 8238691 (+)
G1705043 NA non-coding upstream 111849 8191728 ~ 8191984 (+)
G1705035 NA non-coding upstream 117930 8185561 ~ 8185903 (+)
G1705034 NA non-coding upstream 120552 8182905 ~ 8183281 (+)
G1705031 NA non-coding upstream 139716 8163561 ~ 8164117 (+)
G1705084 NA non-coding downstream 933 8305030 ~ 8305478 (+)
G1705087 NA non-coding downstream 4588 8308685 ~ 8309388 (+)
G1705097 NA non-coding downstream 31587 8335684 ~ 8596863 (+)
G1705098 NA non-coding downstream 46041 8350138 ~ 8352924 (+)
G1705099 NA non-coding downstream 50634 8354731 ~ 8355039 (+)
G1704651 NA other upstream 453713 7849560 ~ 7850120 (+)
G1704562 NA other upstream 645964 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 757989 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1153840 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1296093 7007169 ~ 7007740 (+)
G1705229 NA other downstream 546301 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 604419 8908286 ~ 9091490 (+)
G1705267 NA other downstream 671207 8975304 ~ 8976565 (+)
G1705279 NA other downstream 707829 9011926 ~ 9013163 (+)

Expression


Co-expression Network