G1705084


Basic Information

Item Value
gene id G1705084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8305030 ~ 8305478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952319
ggagagaacaggacccggtgtcatgtaacaggagagaacaggacccggtgttgtataacaggagagaacaggacccggtgtcatgtaacaggagagaacaggacccggtgttgtataacaggagagaacaggacccggtgtcatgtaacaggagagaacaggacccggtgtcctgtaacaggagagaacaggacccggtgtcatgtaacaggagagaacaggacccggtgtcatgtaacaggagagaacaggacccggtgtcatgtaac

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RBBP6-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952319 True 269 lncRNA 0.53 2 8305030 8305478

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 172192 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 295562 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 300605 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 361446 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 421709 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 219478 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 248963 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 263912 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 379441 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 465409 8770887 ~ 8791070 (+)
G1705080 NA non-coding upstream 933 8303833 ~ 8304097 (+)
G1705044 NA non-coding upstream 66339 8193829 ~ 8238691 (+)
G1705043 NA non-coding upstream 113046 8191728 ~ 8191984 (+)
G1705035 NA non-coding upstream 119127 8185561 ~ 8185903 (+)
G1705034 NA non-coding upstream 121749 8182905 ~ 8183281 (+)
G1705087 NA non-coding downstream 3207 8308685 ~ 8309388 (+)
G1705097 NA non-coding downstream 30206 8335684 ~ 8596863 (+)
G1705098 NA non-coding downstream 44660 8350138 ~ 8352924 (+)
G1705099 NA non-coding downstream 49253 8354731 ~ 8355039 (+)
G1705115 NA non-coding downstream 140032 8445510 ~ 8464423 (+)
G1704651 NA other upstream 454910 7849560 ~ 7850120 (+)
G1704562 NA other upstream 647161 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 759186 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1155037 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1297290 7007169 ~ 7007740 (+)
G1705229 NA other downstream 544920 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 603038 8908286 ~ 9091490 (+)
G1705267 NA other downstream 669826 8975304 ~ 8976565 (+)
G1705279 NA other downstream 706448 9011926 ~ 9013163 (+)

Expression


Co-expression Network