Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705097 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 8335684 ~ 8596863 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952334 | False | 322 | lncRNA | 0.41 | 2 | 8335684 | 8337502 |
| TU1952335 | False | 206 | lncRNA | 0.41 | 2 | 8336353 | 8337502 |
| TU1952333 | True | 401 | lncRNA | 0.40 | 2 | 8592629 | 8596863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942992 | NA | coding | upstream | 202846 | 8128485 ~ 8132838 (+) |
| LOC118942853 | LOC106593275 | coding | upstream | 326216 | 8003415 ~ 8009468 (+) |
| LOC118943012 | NA | coding | upstream | 331259 | 8004291 ~ 8004425 (+) |
| yt6j | yt6j | coding | upstream | 392100 | 7925016 ~ 7943584 (+) |
| LOC118942851 | NA | coding | upstream | 452363 | 7882249 ~ 7883321 (+) |
| LOC118936349 | tbk1 | coding | downstream | 88056 | 8684919 ~ 8744666 (+) |
| LOC118942855 | gpr19 | coding | downstream | 174024 | 8770887 ~ 8791070 (+) |
| LOC118942857 | dusp16 | coding | downstream | 222746 | 8819609 ~ 8898371 (+) |
| LOC118942858 | LOC106612417 | coding | downstream | 267468 | 8864331 ~ 8869236 (+) |
| eps8a | LOC106594571 | coding | downstream | 311423 | 8908286 ~ 9091490 (+) |
| G1705087 | NA | non-coding | upstream | 26296 | 8308685 ~ 8309388 (+) |
| G1705084 | NA | non-coding | upstream | 30206 | 8305030 ~ 8305478 (+) |
| G1705080 | NA | non-coding | upstream | 31587 | 8303833 ~ 8304097 (+) |
| G1705044 | NA | non-coding | upstream | 96993 | 8193829 ~ 8238691 (+) |
| G1705043 | NA | non-coding | upstream | 143700 | 8191728 ~ 8191984 (+) |
| G1705171 | NA | non-coding | downstream | 19742 | 8616605 ~ 8616891 (+) |
| G1705177 | NA | non-coding | downstream | 78702 | 8675565 ~ 8675864 (+) |
| G1705181 | NA | non-coding | downstream | 90163 | 8687026 ~ 8687455 (+) |
| G1705184 | NA | non-coding | downstream | 99991 | 8696854 ~ 8700184 (+) |
| G1705185 | NA | non-coding | downstream | 104459 | 8701322 ~ 8704358 (+) |
| G1704651 | NA | other | upstream | 485564 | 7849560 ~ 7850120 (+) |
| G1704562 | NA | other | upstream | 677815 | 7657429 ~ 7657869 (+) |
| LOC118942849 | arhgap8 | other | upstream | 789840 | 7527527 ~ 7561975 (+) |
| G1704409 | NA | other | upstream | 1185691 | 7149400 ~ 7149993 (+) |
| G1704232 | NA | other | upstream | 1327944 | 7007169 ~ 7007740 (+) |
| G1705229 | NA | other | downstream | 253535 | 8850398 ~ 8851107 (+) |
| G1705267 | NA | other | downstream | 378441 | 8975304 ~ 8976565 (+) |
| G1705279 | NA | other | downstream | 415063 | 9011926 ~ 9013163 (+) |
| G1705918 | NA | other | downstream | 1058435 | 9655298 ~ 9655718 (+) |
