G1705098


Basic Information

Item Value
gene id G1705098
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8350138 ~ 8352924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952341
CACTGGTATGGGGTAGAGaggtctggttttaacccactggtatagggtagagaggtctggttttaacccactggtatgggatagagaggtctggttttaacccactggtatggggtagagaggtctggttttaacccactGGTATGGGGTAGAGAGgtctggttttaacccactggtatggggtagaaaggtctggttttaacccctgacccactggtatggggtagagagGTCTGGTTTTAACCCCTGGTGTGGGGTAGAA
>TU1952343
CACTGGTATGGGGTAGAGaggtctggttttaacccactggtatagggtagagaggtctggttttaacccactggtatgggatagagaggtctggttttaacccactggtatggggtagagaggtctggttttaacccactGGTATGGGGTAGAGAGgtctggttttaacccactggtatggggtagaaaggtctggttttaacccctgacccactggtatggggtagagaggtctggttttaacccactGGTATGGGGTAGAGAGGTCTGGTTTTAACCCCTGACCCACTGGTATGGGTAGAGaggtctggttttaacccactggtatgggtagaaaggtctggttttaacccactggtatggggtagagtggtctggttttaacccactggtatgggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952341 False 262 lncRNA 0.50 3 8350138 8352924
TU1952343 True 399 lncRNA 0.50 4 8350138 8351040

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 217300 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 340670 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 345713 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 406554 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 466817 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 172032 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 201517 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 216466 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 331995 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 417963 8770887 ~ 8791070 (+)
G1705087 NA non-coding upstream 40750 8308685 ~ 8309388 (+)
G1705084 NA non-coding upstream 44660 8305030 ~ 8305478 (+)
G1705080 NA non-coding upstream 46041 8303833 ~ 8304097 (+)
G1705044 NA non-coding upstream 111447 8193829 ~ 8238691 (+)
G1705043 NA non-coding upstream 158154 8191728 ~ 8191984 (+)
G1705099 NA non-coding downstream 1807 8354731 ~ 8355039 (+)
G1705115 NA non-coding downstream 92586 8445510 ~ 8464423 (+)
G1705121 NA non-coding downstream 126717 8479641 ~ 8482134 (+)
G1705125 NA non-coding downstream 151255 8504179 ~ 8504939 (+)
G1705126 NA non-coding downstream 152322 8505246 ~ 8506429 (+)
G1704651 NA other upstream 500018 7849560 ~ 7850120 (+)
G1704562 NA other upstream 692269 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 804294 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1200145 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1342398 7007169 ~ 7007740 (+)
G1705229 NA other downstream 497474 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 555592 8908286 ~ 9091490 (+)
G1705267 NA other downstream 622380 8975304 ~ 8976565 (+)
G1705279 NA other downstream 659002 9011926 ~ 9013163 (+)

Expression


Co-expression Network