G1705129


Basic Information

Item Value
gene id G1705129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8514577 ~ 8515185 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952385
CAGgacctatcttccctataggtctACATTAAAATATAACCACTGTATGTTTCAATATGAGCATCTCCACAGGTTctatcttccctataggtctACATTAAAATACAACCACTGTACGTTTCAATATGAGCATCTCCACAGGTTctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctACATTAAAATACAACCACTGTACGTTTCAATA
>TU1952386
CAGgacctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctACATTAAAATACAACCACTGTACGTTTCAATATGAGCATCTCCACAGGTTctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctacattaaaatacaaccactgtatgtttcaatatgagcatctccacaggacctatcttccctataggtctACATTAAAATACAACCACTGTACGTTTCAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952385 False 402 lncRNA 0.37 3 8514577 8515185
TU1952386 True 333 lncRNA 0.38 3 8514577 8515185

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 381739 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 505109 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 510152 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 570993 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 631256 7882249 ~ 7883321 (+)
LOC118942854 NA coding downstream 9771 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 39256 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 54205 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 169734 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 255702 8770887 ~ 8791070 (+)
G1705126 NA non-coding upstream 8148 8505246 ~ 8506429 (+)
G1705125 NA non-coding upstream 9638 8504179 ~ 8504939 (+)
G1705121 NA non-coding upstream 32443 8479641 ~ 8482134 (+)
G1705115 NA non-coding upstream 50154 8445510 ~ 8464423 (+)
G1705099 NA non-coding upstream 159538 8354731 ~ 8355039 (+)
G1705142 NA non-coding downstream 30529 8545714 ~ 8547129 (+)
G1705146 NA non-coding downstream 40588 8555773 ~ 8557530 (+)
G1705171 NA non-coding downstream 101420 8616605 ~ 8616891 (+)
G1705177 NA non-coding downstream 160380 8675565 ~ 8675864 (+)
G1704651 NA other upstream 664457 7849560 ~ 7850120 (+)
G1704562 NA other upstream 856708 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 968733 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1364584 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1506837 7007169 ~ 7007740 (+)
G1705229 NA other downstream 335213 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 393331 8908286 ~ 9091490 (+)
G1705267 NA other downstream 460119 8975304 ~ 8976565 (+)
G1705279 NA other downstream 496741 9011926 ~ 9013163 (+)

Expression


Co-expression Network