Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705422 |
| gene name | LOC106595994 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 8624388 ~ 8625848 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| low-density lipoprotein receptor-related protein 6-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952915 | False | 584 | lncRNA | 0.55 | 3 | 8624388 | 8625550 |
| TU1952916 | True | 449 | lncRNA | 0.55 | 3 | 8624388 | 8625848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942993 | NA | coding | downstream | 436001 | 8187334 ~ 8188387 (-) |
| pthlha | NA | coding | downstream | 577372 | 8024974 ~ 8047016 (-) |
| LOC110515713 | LOC106609844 | coding | downstream | 621347 | 7945498 ~ 8003041 (-) |
| LOC110517214 | LOC106599091 | coding | downstream | 699648 | 7901712 ~ 7924740 (-) |
| LOC118942852 | NA | coding | downstream | 734115 | 7888911 ~ 7890273 (-) |
| LOC118942856 | crbl2 | coding | upstream | 180598 | 8805889 ~ 8808961 (-) |
| LOC118942860 | NA | coding | upstream | 311295 | 8937143 ~ 8938405 (-) |
| LOC118942862 | NA | coding | upstream | 364883 | 8990530 ~ 8991221 (-) |
| LOC118942861 | NA | coding | upstream | 459598 | 9085093 ~ 9090115 (-) |
| LOC118942864 | NA | coding | upstream | 475979 | 9100061 ~ 9104616 (-) |
| G1705416 | NA | non-coding | downstream | 12021 | 8611331 ~ 8612367 (-) |
| G1705383 | NA | non-coding | downstream | 102391 | 8521049 ~ 8521997 (-) |
| G1705365 | NA | non-coding | downstream | 134195 | 8476445 ~ 8490193 (-) |
| G1705362 | NA | non-coding | downstream | 155280 | 8467371 ~ 8469108 (-) |
| G1705358 | NA | non-coding | downstream | 159488 | 8456626 ~ 8464900 (-) |
| G1705454 | NA | non-coding | upstream | 71289 | 8697137 ~ 8699991 (-) |
| G1705468 | NA | non-coding | upstream | 86669 | 8712517 ~ 8720911 (-) |
| G1705484 | gpr19 | non-coding | upstream | 163778 | 8789626 ~ 8793132 (-) |
| G1705485 | NA | non-coding | upstream | 167793 | 8793641 ~ 8794263 (-) |
| G1705386 | NA | other | downstream | 91585 | 8531735 ~ 8532803 (-) |
| G1704927 | NA | other | downstream | 662148 | 7941149 ~ 7962240 (-) |
| LOC118936572 | LOC108250668 | other | downstream | 856372 | 7585971 ~ 7768303 (-) |
| LOC118942865 | LOC106593190 | other | upstream | 648749 | 9261999 ~ 9277148 (-) |
| LOC110515809 | LOC106592244 | other | upstream | 842775 | 9464081 ~ 9480516 (-) |
| G1705975 | NA | other | upstream | 1016102 | 9641950 ~ 9642941 (-) |
