G1705177


Basic Information

Item Value
gene id G1705177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8675565 ~ 8675864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952512
TAAACATCTGATAATCTCAGGTAAACATCTGATAATCTCAGGTAAACCGTTGATAATCTCAGGTGAACATCTGATAATCTCAGGTGAACATCTGATAATCTCAGGTAAACAGCTGATAATCTCAGGTAAACCGCTGATAATCTCAGGTAAACATCTGATAATCTCAGGTGAACATCTGATAATCTCAGGTGAACATCTGATAATCTCAGGTGAACATCTGATAATCTCAGGTGAACA

Function

NR:

description
hypothetical protein EH28_18858

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952512 True 237 lncRNA 0.37 2 8675565 8675864

Neighbor

gene id symbol gene type direction distance location
LOC110512606 lrp6 coding upstream 6167 8569390 ~ 8669398 (+)
LOC118942994 LOC106591951 coding upstream 114084 8538928 ~ 8564807 (+)
LOC118942854 NA coding upstream 142755 8524956 ~ 8532810 (+)
LOC118942992 NA coding upstream 542727 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 666097 8003415 ~ 8009468 (+)
LOC118936349 tbk1 coding downstream 9055 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 95023 8770887 ~ 8791070 (+)
LOC118942857 dusp16 coding downstream 143745 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding downstream 188467 8864331 ~ 8869236 (+)
eps8a LOC106594571 coding downstream 232422 8908286 ~ 9091490 (+)
G1705171 NA non-coding upstream 58674 8616605 ~ 8616891 (+)
G1705097 NA non-coding upstream 78702 8335684 ~ 8596863 (+)
G1705146 NA non-coding upstream 118035 8555773 ~ 8557530 (+)
G1705142 NA non-coding upstream 128436 8545714 ~ 8547129 (+)
G1705181 NA non-coding downstream 11162 8687026 ~ 8687455 (+)
G1705184 NA non-coding downstream 20990 8696854 ~ 8700184 (+)
G1705185 NA non-coding downstream 25458 8701322 ~ 8704358 (+)
G1705188 NA non-coding downstream 30472 8706336 ~ 8706812 (+)
G1704651 NA other upstream 825445 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1017696 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 1129721 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1525572 7149400 ~ 7149993 (+)
G1705229 NA other downstream 174534 8850398 ~ 8851107 (+)
G1705267 NA other downstream 299440 8975304 ~ 8976565 (+)
G1705279 NA other downstream 336062 9011926 ~ 9013163 (+)
G1705918 NA other downstream 979434 9655298 ~ 9655718 (+)

Expression


Co-expression Network