G1705454



Basic Information


Item Value
gene id G1705454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8697137 ~ 8699991 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1952967
agaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacacagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttctggtgttacagaacacatagtgttatatacaggtgtgttacagaacacattgtgttatatacaggtgtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttctggtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttctggtgttacagaacacatagtgttatatacaggtgtgttacagaacacattgtgttatatacaggtgtgttacagaacacattgtgttatatacaggtgtgttttctggtgttacagaacacatagtgttatatacaggtgtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacacagtgttatatacaggtgtgttacagaacacatagtgttatatacaggtgtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttcaggtgttacagaacacatagtgttatatacaggtgtgttttctGGTGTTACAGAAC

Function


NR:

description
PREDICTED: LOW QUALITY PROTEIN: centromere-associated protein E-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1952967 True 775 lncRNA 0.36 4 8697137 8699991

Neighbor


gene id symbol gene type direction distance location
LOC118942993 NA coding downstream 508750 8187334 ~ 8188387 (-)
pthlha NA coding downstream 650121 8024974 ~ 8047016 (-)
LOC110515713 LOC106609844 coding downstream 694096 7945498 ~ 8003041 (-)
LOC110517214 LOC106599091 coding downstream 772397 7901712 ~ 7924740 (-)
LOC118942852 NA coding downstream 806864 7888911 ~ 7890273 (-)
LOC118942856 crbl2 coding upstream 106455 8805889 ~ 8808961 (-)
LOC118942860 NA coding upstream 237152 8937143 ~ 8938405 (-)
LOC118942862 NA coding upstream 290740 8990530 ~ 8991221 (-)
LOC118942861 NA coding upstream 385455 9085093 ~ 9090115 (-)
LOC118942864 NA coding upstream 401836 9100061 ~ 9104616 (-)
G1705422 LOC106595994 non-coding downstream 71289 8624388 ~ 8625848 (-)
G1705416 NA non-coding downstream 84770 8611331 ~ 8612367 (-)
G1705383 NA non-coding downstream 175140 8521049 ~ 8521997 (-)
G1705365 NA non-coding downstream 206944 8476445 ~ 8490193 (-)
G1705362 NA non-coding downstream 228029 8467371 ~ 8469108 (-)
G1705468 NA non-coding upstream 12526 8712517 ~ 8720911 (-)
G1705484 gpr19 non-coding upstream 89635 8789626 ~ 8793132 (-)
G1705485 NA non-coding upstream 93650 8793641 ~ 8794263 (-)
G1705491 NA non-coding upstream 152844 8852835 ~ 8854728 (-)
G1705386 NA other downstream 164334 8531735 ~ 8532803 (-)
G1704927 NA other downstream 734897 7941149 ~ 7962240 (-)
LOC118936572 LOC108250668 other downstream 929121 7585971 ~ 7768303 (-)
LOC118942865 LOC106593190 other upstream 574606 9261999 ~ 9277148 (-)
LOC110515809 LOC106592244 other upstream 768632 9464081 ~ 9480516 (-)
G1705975 NA other upstream 941959 9641950 ~ 9642941 (-)

Expression



Co-expression Network