G1705207


Basic Information

Item Value
gene id G1705207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8760475 ~ 8761839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952547
acctggagCGCTCCCGTCACTGTTGAGTAGGGACACACACCTGATTCCGCATATAGAAGTAGGCTAGCTGGCTTGCAACCAGATATCGGCCTGttaatgtgcccatttggggatgtctgatTAGTTTTTCTGATTGTCGtaactcaccaccactaatgaggaGTTTCTCAAAGTGTTTTtctcttcacctcaaacagcaagttaacaaagtctgtttttagaaTCTAATGTAATGctccagtggaaacgtcataaaataccTGATTTACTTCTTATCCCCTGAACAAATAGCCTGTTAGCATCacctgatagagggagagactggCACAGGAAACTCTGAGGGTCCAGAATACTTTATACAACGTTGGAAGTTAGCTAGAGCTTTGGACCGGCAGAATCTGGGAAGGTCAGCAACGGGtcatatgtctcaagttttgaggaagtgtCCAATAGGCAACGCGGACTGAAGGAACGtcgtttttagagaatttggcagaacgtccaaccggcctcacatccacagaccacgtcagcccaggacctctacatccacagaccacgtcagcccaggacctctacatccacagaccacgtcagcccaggacctctacatccaca
>TU1952548
acctggagCGCTCCCGTCACTGTTGAGTAGGGACACACACCTGATTCCGCATATAGAAGTAGGCTAGCTGGCTTGCAACCAGATATCGGCCTGttaatgtgcccatttggggatgtctgatTAGTTTTTCTGATTGTCGtaactcaccaccactaatgaggaGTTTCTCAAAGTGTTTTtctcttcacctcaaacagcaagttaacaaagtctgtttttagaaTCTAATGTAATGctccagtggaaacgtcataaaataccTGATTTACTTCTTATCCCCTGAACAAATAGCCTGTTAGCATCacctgatagagggagagactggCACAGGAAACTCTGAGGGTCCAGAATACTTTATACAACGTTGGAAGTTAGCTAGAGCTTTGGACCGGCAGAATCTGGGAAGGTCAGCAACGGGtcatatgtctcaagttttgaggaagtgtCCAATAGGCAACGCGGACTGAAGGAACGtcgtttttagagaatttggcagaacgtccaaccggcctcacatccacagaccacgtcagcccaggacctccacatccacagaccacgtcagcccaggacctccacatccacagaccacgtcagcccaggacctctacatccacagaccacgtcagcccaggacctctacatcc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952547 False 618 lncRNA 0.47 2 8760475 8761508
TU1952548 True 647 lncRNA 0.48 2 8760475 8761839

Neighbor

gene id symbol gene type direction distance location
LOC118936349 tbk1 coding upstream 16010 8684919 ~ 8744666 (+)
LOC110512606 lrp6 coding upstream 91077 8569390 ~ 8669398 (+)
LOC118942994 LOC106591951 coding upstream 198994 8538928 ~ 8564807 (+)
LOC118942854 NA coding upstream 227665 8524956 ~ 8532810 (+)
LOC118942992 NA coding upstream 627637 8128485 ~ 8132838 (+)
LOC118942855 gpr19 coding downstream 9048 8770887 ~ 8791070 (+)
LOC118942857 dusp16 coding downstream 57770 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding downstream 102492 8864331 ~ 8869236 (+)
eps8a LOC106594571 coding downstream 146447 8908286 ~ 9091490 (+)
LOC118942863 NA coding downstream 262535 9024374 ~ 9027016 (+)
G1705203 NA non-coding upstream 4847 8755150 ~ 8755628 (+)
G1705188 NA non-coding upstream 53663 8706336 ~ 8706812 (+)
G1705185 NA non-coding upstream 56117 8701322 ~ 8704358 (+)
G1705184 NA non-coding upstream 60291 8696854 ~ 8700184 (+)
G1705211 NA non-coding downstream 18378 8780217 ~ 8781445 (+)
G1705217 NA non-coding downstream 35089 8796928 ~ 8797276 (+)
G1705216 NA non-coding downstream 41224 8803063 ~ 8807946 (+)
G1705227 NA non-coding downstream 83676 8845515 ~ 8846064 (+)
G1705214 NA non-coding downstream 110926 8872765 ~ 8873260 (+)
G1704651 NA other upstream 910355 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1102606 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 1214631 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1610482 7149400 ~ 7149993 (+)
G1705229 NA other downstream 88559 8850398 ~ 8851107 (+)
G1705267 NA other downstream 213465 8975304 ~ 8976565 (+)
G1705279 NA other downstream 250087 9011926 ~ 9013163 (+)
G1705918 NA other downstream 893459 9655298 ~ 9655718 (+)

Expression


Co-expression Network