G1705211


Basic Information

Item Value
gene id G1705211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8780217 ~ 8781445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952553
gggcaggatataacctacctcaacctcaacacatacacctgtcccctgggtctgggctggctataacctacctcaacctcaacacataaacctgtcccctgggtctgggcagGATATAaccaacctcaacacataaacctgtcccctgggtctgggctggctataacctacctcaacctcaacacataaacctgtcccctgggtctgggctggctaacctacctcaacacataaacctgtcccctgggtctgggctggctataacctacctcaacctcaacacataaacctgtcccctggatCTGGGCTGGCtaacctacctcaacacataaacctgtcccctgggtctgggctggctataacctacctcagtCTCCACACATAATCACCTCCACACATAATCATCTCCCCTAAATTACATCAGCCTCCACACATAATCCCCTCCCCTAGAGTACCTCAGCCTCCACACATAATCCCCTCCACACATTACCCTCTATCCTAGAGTACCTCAGTCTTCACACATAATCCCCTCCCCTAGATTACCTCAGCCTCCACACATAATCGCCTCCCCTAGAGTACCTCAGCCTCCACACATAATCCCCTCCCCTAGATTACCTCAGCCTCCACACATAATCCCCTCCCCTAGAGTACCTCAGCCTCCACACATAATCCCCTCCCCTAAATTACCTCAGCCTCCACACATAATCCCCTCCCCTAGAGTACCTCAGCCTCCACACATAATTCCCTCCCCTAGATTACCTCAGCCTCCACACATAATTCCCTCCCCTAGATTACCTCAGCCTCCACACATAATCCCCTCCCCTAGAGTACCTCAGCCTCCACACATAATCCCCTCCCCTAAATTACCTCAGCCTCCACACATAATCCCCTCCCCTAGAGTACCTCAGCCTCCACACATAATCCCCTCCACACATCACCCTCTCTCCTAGAGTACCTCAGTCTTCACACATAATCCCCTCCCCTAAATTACCTCAGCCTCCACACATAATCCCCTCCCCTAGAGTACTTCAGCCTCCACACATAATCCC

Function

NR:

description
uncharacterized protein LOC111671771 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952553 True 1049 lncRNA 0.52 2 8780217 8781445

Neighbor

gene id symbol gene type direction distance location
LOC118936349 tbk1 coding upstream 35752 8684919 ~ 8744666 (+)
LOC110512606 lrp6 coding upstream 110819 8569390 ~ 8669398 (+)
LOC118942994 LOC106591951 coding upstream 218736 8538928 ~ 8564807 (+)
LOC118942854 NA coding upstream 247407 8524956 ~ 8532810 (+)
LOC118942992 NA coding upstream 647379 8128485 ~ 8132838 (+)
LOC118942857 dusp16 coding downstream 38164 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding downstream 82886 8864331 ~ 8869236 (+)
eps8a LOC106594571 coding downstream 126841 8908286 ~ 9091490 (+)
LOC118942863 NA coding downstream 242929 9024374 ~ 9027016 (+)
LOC118942859 NA coding downstream 301351 9082796 ~ 9084558 (+)
G1705207 NA non-coding upstream 18378 8760475 ~ 8761839 (+)
G1705203 NA non-coding upstream 24589 8755150 ~ 8755628 (+)
G1705188 NA non-coding upstream 73405 8706336 ~ 8706812 (+)
G1705185 NA non-coding upstream 75859 8701322 ~ 8704358 (+)
G1705217 NA non-coding downstream 15483 8796928 ~ 8797276 (+)
G1705216 NA non-coding downstream 21618 8803063 ~ 8807946 (+)
G1705227 NA non-coding downstream 64070 8845515 ~ 8846064 (+)
G1705214 NA non-coding downstream 91320 8872765 ~ 8873260 (+)
G1705248 NA non-coding downstream 128547 8909992 ~ 8911381 (+)
G1704651 NA other upstream 930097 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1122348 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 1234373 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1630224 7149400 ~ 7149993 (+)
G1705229 NA other downstream 68953 8850398 ~ 8851107 (+)
G1705267 NA other downstream 193859 8975304 ~ 8976565 (+)
G1705279 NA other downstream 230481 9011926 ~ 9013163 (+)
G1705918 NA other downstream 873853 9655298 ~ 9655718 (+)

Expression


Co-expression Network