Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 8796928 ~ 8797276 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952580 | True | 318 | lncRNA | 0.46 | 2 | 8796928 | 8797276 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942855 | gpr19 | coding | upstream | 5858 | 8770887 ~ 8791070 (+) |
| LOC118936349 | tbk1 | coding | upstream | 52463 | 8684919 ~ 8744666 (+) |
| LOC110512606 | lrp6 | coding | upstream | 127530 | 8569390 ~ 8669398 (+) |
| LOC118942994 | LOC106591951 | coding | upstream | 235447 | 8538928 ~ 8564807 (+) |
| LOC118942854 | NA | coding | upstream | 264118 | 8524956 ~ 8532810 (+) |
| LOC118942857 | dusp16 | coding | downstream | 22333 | 8819609 ~ 8898371 (+) |
| LOC118942858 | LOC106612417 | coding | downstream | 67055 | 8864331 ~ 8869236 (+) |
| eps8a | LOC106594571 | coding | downstream | 111010 | 8908286 ~ 9091490 (+) |
| LOC118942863 | NA | coding | downstream | 227098 | 9024374 ~ 9027016 (+) |
| LOC118942859 | NA | coding | downstream | 285520 | 9082796 ~ 9084558 (+) |
| G1705211 | NA | non-coding | upstream | 15483 | 8780217 ~ 8781445 (+) |
| G1705207 | NA | non-coding | upstream | 35089 | 8760475 ~ 8761839 (+) |
| G1705203 | NA | non-coding | upstream | 41300 | 8755150 ~ 8755628 (+) |
| G1705188 | NA | non-coding | upstream | 90116 | 8706336 ~ 8706812 (+) |
| G1705216 | NA | non-coding | downstream | 5787 | 8803063 ~ 8807946 (+) |
| G1705227 | NA | non-coding | downstream | 48239 | 8845515 ~ 8846064 (+) |
| G1705214 | NA | non-coding | downstream | 75489 | 8872765 ~ 8873260 (+) |
| G1705248 | NA | non-coding | downstream | 112716 | 8909992 ~ 8911381 (+) |
| G1705261 | NA | non-coding | downstream | 165648 | 8962924 ~ 8965174 (+) |
| G1704651 | NA | other | upstream | 946808 | 7849560 ~ 7850120 (+) |
| G1704562 | NA | other | upstream | 1139059 | 7657429 ~ 7657869 (+) |
| LOC118942849 | arhgap8 | other | upstream | 1251084 | 7527527 ~ 7561975 (+) |
| G1704409 | NA | other | upstream | 1646935 | 7149400 ~ 7149993 (+) |
| G1705229 | NA | other | downstream | 53122 | 8850398 ~ 8851107 (+) |
| G1705267 | NA | other | downstream | 178028 | 8975304 ~ 8976565 (+) |
| G1705279 | NA | other | downstream | 214650 | 9011926 ~ 9013163 (+) |
| G1705918 | NA | other | downstream | 858022 | 9655298 ~ 9655718 (+) |
