G1705227


Basic Information

Item Value
gene id G1705227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8845515 ~ 8846064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952593
ctaggatgtgttattttagtgttccctttatttttttgagcagtgtatatactagCCATAGGTCTCAGACTTGATGATGAGTAGAAACTGTAACATTAAGCTAGGAGCACAGCTGGGTCTGAGAGGTGATGCTGGCATTCCATTCAGCAGTCTCCATGACATCACCATGATGACATCACCAACCAACAGACGTGGGCTCTGAGAATCAGAGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952593 True 214 lncRNA 0.43 2 8845515 8846064

Neighbor

gene id symbol gene type direction distance location
LOC118942855 gpr19 coding upstream 54445 8770887 ~ 8791070 (+)
LOC118936349 tbk1 coding upstream 101050 8684919 ~ 8744666 (+)
LOC110512606 lrp6 coding upstream 176117 8569390 ~ 8669398 (+)
LOC118942994 LOC106591951 coding upstream 284034 8538928 ~ 8564807 (+)
LOC118942854 NA coding upstream 312705 8524956 ~ 8532810 (+)
LOC118942858 LOC106612417 coding downstream 18267 8864331 ~ 8869236 (+)
eps8a LOC106594571 coding downstream 62222 8908286 ~ 9091490 (+)
LOC118942863 NA coding downstream 178310 9024374 ~ 9027016 (+)
LOC118942859 NA coding downstream 236732 9082796 ~ 9084558 (+)
zgc:194209 LOC106591857 coding downstream 371161 9217225 ~ 9241339 (+)
G1705216 NA non-coding upstream 37569 8803063 ~ 8807946 (+)
G1705217 NA non-coding upstream 48239 8796928 ~ 8797276 (+)
G1705211 NA non-coding upstream 64070 8780217 ~ 8781445 (+)
G1705207 NA non-coding upstream 83676 8760475 ~ 8761839 (+)
G1705203 NA non-coding upstream 89887 8755150 ~ 8755628 (+)
G1705214 NA non-coding downstream 26701 8872765 ~ 8873260 (+)
G1705248 NA non-coding downstream 63928 8909992 ~ 8911381 (+)
G1705261 NA non-coding downstream 116860 8962924 ~ 8965174 (+)
G1705263 NA non-coding downstream 117948 8964012 ~ 8972856 (+)
G1705264 NA non-coding downstream 120650 8966714 ~ 8968814 (+)
G1704651 NA other upstream 995395 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1187646 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 1299671 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1695522 7149400 ~ 7149993 (+)
G1705229 NA other downstream 4334 8850398 ~ 8851107 (+)
G1705267 NA other downstream 129240 8975304 ~ 8976565 (+)
G1705279 NA other downstream 165862 9011926 ~ 9013163 (+)
G1705918 NA other downstream 809234 9655298 ~ 9655718 (+)

Expression


Co-expression Network