Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705504 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 8859100 ~ 8861698 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: splicing factor 3A subunit 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1953052 | True | 340 | lncRNA | 0.47 | 3 | 8859100 | 8861698 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942856 | crbl2 | coding | downstream | 50139 | 8805889 ~ 8808961 (-) |
| LOC118942993 | NA | coding | downstream | 670713 | 8187334 ~ 8188387 (-) |
| pthlha | NA | coding | downstream | 812084 | 8024974 ~ 8047016 (-) |
| LOC110515713 | LOC106609844 | coding | downstream | 856059 | 7945498 ~ 8003041 (-) |
| LOC110517214 | LOC106599091 | coding | downstream | 934360 | 7901712 ~ 7924740 (-) |
| LOC118942860 | NA | coding | upstream | 75445 | 8937143 ~ 8938405 (-) |
| LOC118942862 | NA | coding | upstream | 129033 | 8990530 ~ 8991221 (-) |
| LOC118942861 | NA | coding | upstream | 223748 | 9085093 ~ 9090115 (-) |
| LOC118942864 | NA | coding | upstream | 240129 | 9100061 ~ 9104616 (-) |
| LOC118942995 | NA | coding | upstream | 245210 | 9106908 ~ 9111439 (-) |
| G1705491 | NA | non-coding | downstream | 4372 | 8852835 ~ 8854728 (-) |
| G1705485 | NA | non-coding | downstream | 64837 | 8793641 ~ 8794263 (-) |
| G1705484 | gpr19 | non-coding | downstream | 65968 | 8789626 ~ 8793132 (-) |
| G1705468 | NA | non-coding | downstream | 138189 | 8712517 ~ 8720911 (-) |
| G1705513 | NA | non-coding | upstream | 23886 | 8885584 ~ 8888167 (-) |
| G1705530 | NA | non-coding | upstream | 76938 | 8938636 ~ 8938899 (-) |
| G1705551 | NA | non-coding | upstream | 117114 | 8978812 ~ 8980028 (-) |
| G1705569 | NA | non-coding | upstream | 156233 | 9017931 ~ 9019653 (-) |
| G1705386 | NA | other | downstream | 326297 | 8531735 ~ 8532803 (-) |
| G1704927 | NA | other | downstream | 896860 | 7941149 ~ 7962240 (-) |
| LOC118942865 | LOC106593190 | other | upstream | 412899 | 9261999 ~ 9277148 (-) |
| LOC110515809 | LOC106592244 | other | upstream | 606925 | 9464081 ~ 9480516 (-) |
| G1705975 | NA | other | upstream | 780252 | 9641950 ~ 9642941 (-) |
| G1706990 | NA | other | upstream | 1498726 | 10360424 ~ 10360975 (-) |
