G1705248


Basic Information

Item Value
gene id G1705248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8909992 ~ 8911381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952643
ggtgcatacctgtataacgtaggtagatgtgGTGCATACCTGTAttacgtaggtagatgaggtacatacctgtataacgtaggtagatgaggtgcatacctgtataacataggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacataggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtattacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtattacgtaggtagatgaggtacatacctgtataacataggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgagttgcatacctgtataacgtaggtagatgaggtacatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgtaggtagatgaggtgcatacctgtataacgaaggtagatgacgtaatgacaCCACGTAAGATGTAGCGCTATAAGTGTAACACATCATTCCTAACCTCGCCCACAATGTCTGCCTTGTGAATCAACCAGTCAACAAgtccagcagtcatttgaaagaataAGAATTTCAGCGAGACGACTCAAAGGTGAAAACCATGAAAGCCAAGACAATGGAATTCACTGCCCAATGGACTCAACCGTCCTCTGTCGTGGGTGTTGTCTTTCGCCGATTGGTCGAGCACCgttacacac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581004

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952643 True 970 lncRNA 0.43 2 8909992 8911381

Neighbor

gene id symbol gene type direction distance location
LOC118942857 dusp16 coding upstream 11621 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 40756 8864331 ~ 8869236 (+)
LOC118942855 gpr19 coding upstream 118922 8770887 ~ 8791070 (+)
LOC118936349 tbk1 coding upstream 165527 8684919 ~ 8744666 (+)
LOC110512606 lrp6 coding upstream 240594 8569390 ~ 8669398 (+)
LOC118942863 NA coding downstream 112993 9024374 ~ 9027016 (+)
LOC118942859 NA coding downstream 171415 9082796 ~ 9084558 (+)
zgc:194209 LOC106591857 coding downstream 305844 9217225 ~ 9241339 (+)
LOC110507941 LOC106592244 coding downstream 425500 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 476336 9387717 ~ 9391585 (+)
G1705214 NA non-coding upstream 36732 8872765 ~ 8873260 (+)
G1705227 NA non-coding upstream 63928 8845515 ~ 8846064 (+)
G1705216 NA non-coding upstream 102046 8803063 ~ 8807946 (+)
G1705217 NA non-coding upstream 112716 8796928 ~ 8797276 (+)
G1705211 NA non-coding upstream 128547 8780217 ~ 8781445 (+)
G1705261 NA non-coding downstream 51543 8962924 ~ 8965174 (+)
G1705263 NA non-coding downstream 52631 8964012 ~ 8972856 (+)
G1705264 NA non-coding downstream 55333 8966714 ~ 8968814 (+)
G1705266 NA non-coding downstream 62351 8973732 ~ 8974086 (+)
G1705274 NA non-coding downstream 83659 8995040 ~ 8996718 (+)
G1705229 NA other upstream 58885 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 348780 8538928 ~ 8564807 (+)
G1704651 NA other upstream 1059872 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1252123 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 1364148 7527527 ~ 7561975 (+)
G1705267 NA other downstream 63923 8975304 ~ 8976565 (+)
G1705279 NA other downstream 100545 9011926 ~ 9013163 (+)
G1705918 NA other downstream 743917 9655298 ~ 9655718 (+)
G1705920 NA other downstream 747950 9659331 ~ 9660140 (+)
G1706013 NA other downstream 836804 9748185 ~ 9753473 (+)

Expression


Co-expression Network