Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705274 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 8995040 ~ 8996718 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1952691 | False | 239 | lncRNA | 0.40 | 2 | 8995040 | 8996718 |
| TU1952694 | False | 307 | lncRNA | 0.40 | 2 | 8995040 | 8996718 |
| TU1952695 | True | 309 | lncRNA | 0.39 | 2 | 8995040 | 8996718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942857 | dusp16 | coding | upstream | 96669 | 8819609 ~ 8898371 (+) |
| LOC118942858 | LOC106612417 | coding | upstream | 125804 | 8864331 ~ 8869236 (+) |
| LOC118942855 | gpr19 | coding | upstream | 203970 | 8770887 ~ 8791070 (+) |
| LOC118936349 | tbk1 | coding | upstream | 250575 | 8684919 ~ 8744666 (+) |
| LOC110512606 | lrp6 | coding | upstream | 325642 | 8569390 ~ 8669398 (+) |
| LOC118942863 | NA | coding | downstream | 27656 | 9024374 ~ 9027016 (+) |
| LOC118942859 | NA | coding | downstream | 86078 | 9082796 ~ 9084558 (+) |
| zgc:194209 | LOC106591857 | coding | downstream | 220507 | 9217225 ~ 9241339 (+) |
| LOC110507941 | LOC106592244 | coding | downstream | 340163 | 9336881 ~ 9354472 (+) |
| LOC118943004 | LOC106591072 | coding | downstream | 390999 | 9387717 ~ 9391585 (+) |
| G1705266 | NA | non-coding | upstream | 20954 | 8973732 ~ 8974086 (+) |
| G1705263 | NA | non-coding | upstream | 22184 | 8964012 ~ 8972856 (+) |
| G1705264 | NA | non-coding | upstream | 26226 | 8966714 ~ 8968814 (+) |
| G1705261 | NA | non-coding | upstream | 29866 | 8962924 ~ 8965174 (+) |
| G1705248 | NA | non-coding | upstream | 83659 | 8909992 ~ 8911381 (+) |
| G1705275 | NA | non-coding | downstream | 2737 | 8999455 ~ 9000860 (+) |
| G1705278 | NA | non-coding | downstream | 12206 | 9008924 ~ 9009347 (+) |
| G1705288 | NA | non-coding | downstream | 39472 | 9036190 ~ 9036407 (+) |
| G1705293 | NA | non-coding | downstream | 49732 | 9046450 ~ 9046714 (+) |
| G1705295 | NA | non-coding | downstream | 50579 | 9047297 ~ 9047704 (+) |
| G1705267 | NA | other | upstream | 18475 | 8975304 ~ 8976565 (+) |
| G1705229 | NA | other | upstream | 143933 | 8850398 ~ 8851107 (+) |
| LOC118942994 | LOC106591951 | other | upstream | 433828 | 8538928 ~ 8564807 (+) |
| G1704651 | NA | other | upstream | 1144920 | 7849560 ~ 7850120 (+) |
| G1704562 | NA | other | upstream | 1337171 | 7657429 ~ 7657869 (+) |
| G1705279 | NA | other | downstream | 15208 | 9011926 ~ 9013163 (+) |
| G1705918 | NA | other | downstream | 658580 | 9655298 ~ 9655718 (+) |
| G1705920 | NA | other | downstream | 662613 | 9659331 ~ 9660140 (+) |
| G1706013 | NA | other | downstream | 751467 | 9748185 ~ 9753473 (+) |
| G1706090 | NA | other | downstream | 918995 | 9915713 ~ 9918019 (+) |
