G1705278


Basic Information

Item Value
gene id G1705278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9008924 ~ 9009347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952699
gtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952699 True 389 lncRNA 0.43 2 9008924 9009347

Neighbor

gene id symbol gene type direction distance location
LOC118942857 dusp16 coding upstream 110553 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 139688 8864331 ~ 8869236 (+)
LOC118942855 gpr19 coding upstream 217854 8770887 ~ 8791070 (+)
LOC118936349 tbk1 coding upstream 264459 8684919 ~ 8744666 (+)
LOC110512606 lrp6 coding upstream 339526 8569390 ~ 8669398 (+)
LOC118942863 NA coding downstream 15027 9024374 ~ 9027016 (+)
LOC118942859 NA coding downstream 73449 9082796 ~ 9084558 (+)
zgc:194209 LOC106591857 coding downstream 207878 9217225 ~ 9241339 (+)
LOC110507941 LOC106592244 coding downstream 327534 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 378370 9387717 ~ 9391585 (+)
G1705275 NA non-coding upstream 8064 8999455 ~ 9000860 (+)
G1705274 NA non-coding upstream 12206 8995040 ~ 8996718 (+)
G1705266 NA non-coding upstream 34838 8973732 ~ 8974086 (+)
G1705263 NA non-coding upstream 36068 8964012 ~ 8972856 (+)
G1705264 NA non-coding upstream 40110 8966714 ~ 8968814 (+)
G1705288 NA non-coding downstream 26843 9036190 ~ 9036407 (+)
G1705293 NA non-coding downstream 37103 9046450 ~ 9046714 (+)
G1705295 NA non-coding downstream 37950 9047297 ~ 9047704 (+)
G1705296 NA non-coding downstream 38520 9047867 ~ 9048128 (+)
G1705297 NA non-coding downstream 42045 9051392 ~ 9052293 (+)
G1705267 NA other upstream 32359 8975304 ~ 8976565 (+)
G1705229 NA other upstream 157817 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 447712 8538928 ~ 8564807 (+)
G1704651 NA other upstream 1158804 7849560 ~ 7850120 (+)
G1704562 NA other upstream 1351055 7657429 ~ 7657869 (+)
G1705279 NA other downstream 2579 9011926 ~ 9013163 (+)
G1705918 NA other downstream 645951 9655298 ~ 9655718 (+)
G1705920 NA other downstream 649984 9659331 ~ 9660140 (+)
G1706013 NA other downstream 738838 9748185 ~ 9753473 (+)
G1706090 NA other downstream 906366 9915713 ~ 9918019 (+)

Expression


Co-expression Network