G1705293


Basic Information

Item Value
gene id G1705293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9046450 ~ 9046714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952715
caacatctacttcaacaactacaactaatacaacaacaactacaacaactacaactaatacaacaacaactacaactacaacatctaccacaacaactacaactaatacaacaactacaacaacaacaacaacaacaacaacatctactacaacaactacaactaatacaacaacaactacaactacaacaactacatctactacaacaactacaactaatacaacaacaacaacaacaacaacatctacttCAACAACTCcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952715 True 265 lncRNA 0.32 1 9046450 9046714

Neighbor

gene id symbol gene type direction distance location
LOC118942863 NA coding upstream 19434 9024374 ~ 9027016 (+)
LOC118942857 dusp16 coding upstream 148079 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 177214 8864331 ~ 8869236 (+)
LOC118942855 gpr19 coding upstream 255380 8770887 ~ 8791070 (+)
LOC118936349 tbk1 coding upstream 301985 8684919 ~ 8744666 (+)
LOC118942859 NA coding downstream 36082 9082796 ~ 9084558 (+)
zgc:194209 LOC106591857 coding downstream 170511 9217225 ~ 9241339 (+)
LOC110507941 LOC106592244 coding downstream 290167 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 341003 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 355780 9402494 ~ 9413171 (+)
G1705288 NA non-coding upstream 10043 9036190 ~ 9036407 (+)
G1705278 NA non-coding upstream 37103 9008924 ~ 9009347 (+)
G1705275 NA non-coding upstream 45590 8999455 ~ 9000860 (+)
G1705274 NA non-coding upstream 49732 8995040 ~ 8996718 (+)
G1705266 NA non-coding upstream 72364 8973732 ~ 8974086 (+)
G1705295 NA non-coding downstream 583 9047297 ~ 9047704 (+)
G1705296 NA non-coding downstream 1153 9047867 ~ 9048128 (+)
G1705297 NA non-coding downstream 4678 9051392 ~ 9052293 (+)
eps8a LOC106594571 non-coding downstream 14275 8908286 ~ 9091490 (+)
G1705304 NA non-coding downstream 47999 9094713 ~ 9095086 (+)
G1705279 NA other upstream 33287 9011926 ~ 9013163 (+)
G1705267 NA other upstream 69885 8975304 ~ 8976565 (+)
G1705229 NA other upstream 195343 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 485238 8538928 ~ 8564807 (+)
G1704651 NA other upstream 1196330 7849560 ~ 7850120 (+)
G1705918 NA other downstream 608584 9655298 ~ 9655718 (+)
G1705920 NA other downstream 612617 9659331 ~ 9660140 (+)
G1706013 NA other downstream 701471 9748185 ~ 9753473 (+)
G1706090 NA other downstream 868999 9915713 ~ 9918019 (+)
G1706152 NA other downstream 1087674 10134388 ~ 10135384 (+)

Expression


Co-expression Network