G1705296


Basic Information

Item Value
gene id G1705296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9047867 ~ 9048128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952718
actgaatgactccggtcctttatacctgatacagaactgaaacacactgaatgactccggtcctttatacctgatacagaactgaaacacactgaatgaCTCGAGTCCTTTATACCTGAtacagaactgaaacacactgaatgactccggtcctttatacctgatacagaactgaaacacactgaatgactccggtcctttatacctgatacagaactgaaacacactgaatgaCTCCGGTCCTTTATACCTGGtacagaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC104958843

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952718 True 262 lncRNA 0.42 1 9047867 9048128

Neighbor

gene id symbol gene type direction distance location
LOC118942863 NA coding upstream 20851 9024374 ~ 9027016 (+)
LOC118942857 dusp16 coding upstream 149496 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 178631 8864331 ~ 8869236 (+)
LOC118942855 gpr19 coding upstream 256797 8770887 ~ 8791070 (+)
LOC118936349 tbk1 coding upstream 303402 8684919 ~ 8744666 (+)
LOC118942859 NA coding downstream 34668 9082796 ~ 9084558 (+)
zgc:194209 LOC106591857 coding downstream 169097 9217225 ~ 9241339 (+)
LOC110507941 LOC106592244 coding downstream 288753 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 339589 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 354366 9402494 ~ 9413171 (+)
G1705295 NA non-coding upstream 163 9047297 ~ 9047704 (+)
G1705293 NA non-coding upstream 1153 9046450 ~ 9046714 (+)
G1705288 NA non-coding upstream 11460 9036190 ~ 9036407 (+)
G1705278 NA non-coding upstream 38520 9008924 ~ 9009347 (+)
G1705275 NA non-coding upstream 47007 8999455 ~ 9000860 (+)
G1705297 NA non-coding downstream 3264 9051392 ~ 9052293 (+)
eps8a LOC106594571 non-coding downstream 12861 8908286 ~ 9091490 (+)
G1705304 NA non-coding downstream 46585 9094713 ~ 9095086 (+)
G1705305 NA non-coding downstream 47268 9095396 ~ 9095606 (+)
G1705309 NA non-coding downstream 54306 9102434 ~ 9106488 (+)
G1705279 NA other upstream 34704 9011926 ~ 9013163 (+)
G1705267 NA other upstream 71302 8975304 ~ 8976565 (+)
G1705229 NA other upstream 196760 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 486655 8538928 ~ 8564807 (+)
G1704651 NA other upstream 1197747 7849560 ~ 7850120 (+)
G1705918 NA other downstream 607170 9655298 ~ 9655718 (+)
G1705920 NA other downstream 611203 9659331 ~ 9660140 (+)
G1706013 NA other downstream 700057 9748185 ~ 9753473 (+)
G1706090 NA other downstream 867585 9915713 ~ 9918019 (+)
G1706152 NA other downstream 1086260 10134388 ~ 10135384 (+)

Expression


Co-expression Network