G1705323


Basic Information

Item Value
gene id G1705323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9152170 ~ 9153074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1952761
attacagatgacagcagtgtactacaggacatagggaacagggtaccattacaGTCTGGCAGTGTACTACaggacatagggaacagggtaccattacagatgacagcagtgtactacaggacatagggaacagggtaccattacaGTCTGGCAGTGTACTACaggacatagggaacagggtaccattacagatgacagcagtgtactacaggacatagggaacagggtaccattacaGATGACAGAGCATCTCTTACCTTGAGGTCcttgttgatggtgttggtggGTTTACAGAGCACCTGGTAGAAGTCAACCACTCCCTCCCCGCTCCAGAGCAGGGTCACTGAGGAGTGGGTGGCGTTCACCGCGTACAGGGACCGCGGAGGGGCTGGCTCTGTCACAAACACAACAGGAGAAACGCCTGGGTCAACCTCCACAGACACAGGTAGACTGTGGTCGTCCCAGACTGTCTTGTCTACTGTTATCCTCTAGTCCACAGACACAGGTAGACTGTAGCTCTGTGGTCGTCCCAGACTGTCTTGTTTACTAGTTAGACCGAACTACTGAGGGATGTGGAAAAGAAggcaggctgtgtcacaaccccAGGTTCACTTCCTCAATCAGCGCTGTTATAAGCTGCTATTGTGACATCCAACATCcagtatacagtcgtggccaaaagttttgagaatgacacaaatataaattttcatgaagtctgcctcagtgtctttagata

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase O-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1952761 True 739 lncRNA 0.49 3 9152170 9153074

Neighbor

gene id symbol gene type direction distance location
eps8a LOC106594571 coding upstream 60680 8908286 ~ 9091490 (+)
LOC118942859 NA coding upstream 67612 9082796 ~ 9084558 (+)
LOC118942863 NA coding upstream 125154 9024374 ~ 9027016 (+)
LOC118942857 dusp16 coding upstream 253799 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 282934 8864331 ~ 8869236 (+)
zgc:194209 LOC106591857 coding downstream 64151 9217225 ~ 9241339 (+)
LOC110507941 LOC106592244 coding downstream 183807 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 234643 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 249420 9402494 ~ 9413171 (+)
LOC118942866 LOC106576670 coding downstream 379030 9532104 ~ 9722986 (+)
G1705309 NA non-coding upstream 45682 9102434 ~ 9106488 (+)
G1705305 NA non-coding upstream 56564 9095396 ~ 9095606 (+)
G1705304 NA non-coding upstream 57084 9094713 ~ 9095086 (+)
G1705297 NA non-coding upstream 99877 9051392 ~ 9052293 (+)
G1705340 NA non-coding downstream 48296 9201370 ~ 9202495 (+)
G1705659 NA non-coding downstream 73563 9226637 ~ 9226973 (+)
G1705660 NA non-coding downstream 76620 9229694 ~ 9231753 (+)
G1705665 NA non-coding downstream 90685 9243759 ~ 9244263 (+)
G1705666 NA non-coding downstream 91509 9244583 ~ 9245096 (+)
G1705279 NA other upstream 139007 9011926 ~ 9013163 (+)
G1705267 NA other upstream 175605 8975304 ~ 8976565 (+)
G1705229 NA other upstream 301063 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 590958 8538928 ~ 8564807 (+)
G1705918 NA other downstream 502224 9655298 ~ 9655718 (+)
G1705920 NA other downstream 506257 9659331 ~ 9660140 (+)
G1706013 NA other downstream 595111 9748185 ~ 9753473 (+)
G1706090 NA other downstream 762639 9915713 ~ 9918019 (+)
G1706152 NA other downstream 981314 10134388 ~ 10135384 (+)

Expression


Co-expression Network