G1705660


Basic Information

Item Value
gene id G1705660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9229694 ~ 9231753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953266
gtctgacagtctaacccctaaccttaactctgactggacagcaggtctgacagtctaaccttaactctgactggacagcaggtctgacagtctaaccttaactctgactggacagcaggtctgacagtctaacccctaaccttaactctgactggacagcaggtctgacagtctaacccctaaccttaactctgactggacagcaggtctgacagtctaacccctaaccttatctCTGAttggacagcaggtctgacatCCTAACCTTAtctctgactggacagcaggtctgacagtctaaccttaactctgactggacagcaggtctgacagtctaaccttgactctgactggacagcaggtctgacagtctaacccctaaccttaactctgactggacagcaggtctgacagtctaacccctaaccttaactctgactggacagcaggtctgacagtctaaccttaactctgactggacagcaggtctgacagtctaacccctaaccttaactctgactagacagcaggtctgacagtctaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953266 True 546 lncRNA 0.49 2 9229694 9231753

Neighbor

gene id symbol gene type direction distance location
eps8a LOC106594571 coding upstream 138204 8908286 ~ 9091490 (+)
LOC118942859 NA coding upstream 145136 9082796 ~ 9084558 (+)
LOC118942863 NA coding upstream 202678 9024374 ~ 9027016 (+)
LOC118942857 dusp16 coding upstream 331323 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 360458 8864331 ~ 8869236 (+)
LOC110507941 LOC106592244 coding downstream 105128 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 155964 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 170741 9402494 ~ 9413171 (+)
LOC118942866 LOC106576670 coding downstream 300351 9532104 ~ 9722986 (+)
LOC118942867 NA coding downstream 537837 9769444 ~ 9771487 (+)
G1705659 NA non-coding upstream 2721 9226637 ~ 9226973 (+)
G1705340 NA non-coding upstream 27199 9201370 ~ 9202495 (+)
G1705323 NA non-coding upstream 76620 9152170 ~ 9153074 (+)
G1705309 NA non-coding upstream 123206 9102434 ~ 9106488 (+)
G1705305 NA non-coding upstream 134088 9095396 ~ 9095606 (+)
G1705665 NA non-coding downstream 12006 9243759 ~ 9244263 (+)
G1705666 NA non-coding downstream 12830 9244583 ~ 9245096 (+)
G1705648 NA non-coding downstream 21453 9253206 ~ 9254111 (+)
G1705649 NA non-coding downstream 24476 9256229 ~ 9257527 (+)
G1705646 NA non-coding downstream 28243 9259996 ~ 9260273 (+)
G1705279 NA other upstream 216531 9011926 ~ 9013163 (+)
G1705267 NA other upstream 253129 8975304 ~ 8976565 (+)
G1705229 NA other upstream 378587 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 668482 8538928 ~ 8564807 (+)
G1705918 NA other downstream 423545 9655298 ~ 9655718 (+)
G1705920 NA other downstream 427578 9659331 ~ 9660140 (+)
G1706013 NA other downstream 516432 9748185 ~ 9753473 (+)
G1706090 NA other downstream 683960 9915713 ~ 9918019 (+)
G1706152 NA other downstream 902635 10134388 ~ 10135384 (+)

Expression


Co-expression Network