G1705649


Basic Information

Item Value
gene id G1705649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9256229 ~ 9257527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953255
ttaaccatcttacatataaaaccctatttgttcattgaaaatgGTGAATAGATCACCACATAttaatgttgggttgtattggagagtctcagtcttaaatcattttccacacacagtctgtgtctatttagttttcatgctaatgagggccgagaatccactctctcacataggtacagtggggcaaaacatttaatacaggtaacgaatggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaatacatttattaaaaatcctacaatgtgattttctggattttcagAAGagaatgtcttccttaattgaccccccataaacgtaacggacaaataccaggagctgtgtcaggccctccacgtctgttgactcatccagctgtaacagacatataccaggagctgtgccaggcccaccacgtctgttgactcatccagctgtaacagacatataccaggagctgtaccaggccacgtctgttgactcatccagctgtaacagacatataccaggagctgtaccaggcctgttgactcatccagctgtaacagacatataccaggagctgtaccaggccacgtctgttgactcatccagctgtaacagacatataccaggagctgtaccaggccacgtctgttgactcatccagctgtaacagacatataccaggagctgtaccaggcctgttgactcatccagctgtaacagacatataccaggagctgtaccaggccacgtctgttgactcatccagctgtaacagacatataccaggagctgtaccaggcctgttgactcatccagctgtaacagacatataccaggagctgtgccaggcccgcctcgtctgttgactcatccagctgtaacagacatataccaggagctgtgccaggccctccaCGTCTGGTGACTCATCCAgttgtaacagacatataccaggagctgtgccaggcccgcctcgtctgttgactcatccagttgtaacgcatataattcactggcttgtatgtgaagcagtaattgtttcaaaacatctcctgccatgtcactgatgcgtcgggaaacagtgttgtttgatggagccattgtctgtatagttttttggggccttttcccccagcattgtcccagccaacaggaagaatgaagtcctccacaatagtatggtgcttgcctgtcctagccactcctccacaatagtatggggcttgcctgtccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953255 True 1299 lncRNA 0.47 1 9256229 9257527

Neighbor

gene id symbol gene type direction distance location
zgc:194209 LOC106591857 coding upstream 14890 9217225 ~ 9241339 (+)
eps8a LOC106594571 coding upstream 164739 8908286 ~ 9091490 (+)
LOC118942859 NA coding upstream 171671 9082796 ~ 9084558 (+)
LOC118942863 NA coding upstream 229213 9024374 ~ 9027016 (+)
LOC118942858 LOC106612417 coding upstream 386993 8864331 ~ 8869236 (+)
LOC110507941 LOC106592244 coding downstream 79354 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 130190 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 144967 9402494 ~ 9413171 (+)
LOC118942866 LOC106576670 coding downstream 274577 9532104 ~ 9722986 (+)
LOC118942867 NA coding downstream 512063 9769444 ~ 9771487 (+)
G1705648 NA non-coding upstream 2118 9253206 ~ 9254111 (+)
G1705666 NA non-coding upstream 11133 9244583 ~ 9245096 (+)
G1705665 NA non-coding upstream 11966 9243759 ~ 9244263 (+)
G1705660 NA non-coding upstream 24476 9229694 ~ 9231753 (+)
G1705659 NA non-coding upstream 29256 9226637 ~ 9226973 (+)
G1705646 NA non-coding downstream 2469 9259996 ~ 9260273 (+)
G1705667 LOC106591858 non-coding downstream 6385 9263912 ~ 9264241 (+)
G1705669 NA non-coding downstream 12101 9269628 ~ 9270386 (+)
G1705670 NA non-coding downstream 12933 9270460 ~ 9270890 (+)
G1705671 gns non-coding downstream 17027 9274554 ~ 9275993 (+)
G1705279 NA other upstream 243066 9011926 ~ 9013163 (+)
G1705267 NA other upstream 279664 8975304 ~ 8976565 (+)
G1705229 NA other upstream 405122 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 695017 8538928 ~ 8564807 (+)
G1705918 NA other downstream 397771 9655298 ~ 9655718 (+)
G1705920 NA other downstream 401804 9659331 ~ 9660140 (+)
G1706013 NA other downstream 490658 9748185 ~ 9753473 (+)
G1706090 NA other downstream 658186 9915713 ~ 9918019 (+)
G1706152 NA other downstream 876861 10134388 ~ 10135384 (+)

Expression


Co-expression Network