G1705667 (LOC106591858)


Basic Information

Item Value
gene id G1705667
gene name LOC106591858
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9263912 ~ 9264241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953273
CTCGTTGTCATCAAACTCGCAGTACTGGAGGTTGGCAGAGGGGGCGACGGTACGAACGCAGGCGTACGTGTTGTTGAAGGagtcctcacacacacagtcagggaaACATACGGAGACCCCAGGACCCAGCAGGGGGCAGGCGGGATCAGACACATTAGACCCCTCCCCTTCATACTCCACCAGGAAGTCTGTTCTCCACGTAGTGCTGTTCACAGATCCCTCCTgacacagagaatacacacaccaGTTAAACACTGATCCCTCCTgacacagagaatacacacaaCTGCCACCATGTCTAGGCTACGTTGCGCTAGGCTATGTTGCGCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953273 True 330 lncRNA 0.55 1 9263912 9264241

Neighbor

gene id symbol gene type direction distance location
zgc:194209 LOC106591857 coding upstream 22573 9217225 ~ 9241339 (+)
eps8a LOC106594571 coding upstream 172422 8908286 ~ 9091490 (+)
LOC118942859 NA coding upstream 179354 9082796 ~ 9084558 (+)
LOC118942863 NA coding upstream 236896 9024374 ~ 9027016 (+)
LOC118942858 LOC106612417 coding upstream 394676 8864331 ~ 8869236 (+)
LOC110507941 LOC106592244 coding downstream 72640 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 123476 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 138253 9402494 ~ 9413171 (+)
LOC118942866 LOC106576670 coding downstream 267863 9532104 ~ 9722986 (+)
LOC118942867 NA coding downstream 505349 9769444 ~ 9771487 (+)
G1705646 NA non-coding upstream 3639 9259996 ~ 9260273 (+)
G1705649 NA non-coding upstream 6385 9256229 ~ 9257527 (+)
G1705648 NA non-coding upstream 9801 9253206 ~ 9254111 (+)
G1705666 NA non-coding upstream 18816 9244583 ~ 9245096 (+)
G1705665 NA non-coding upstream 19649 9243759 ~ 9244263 (+)
G1705669 NA non-coding downstream 5387 9269628 ~ 9270386 (+)
G1705670 NA non-coding downstream 6219 9270460 ~ 9270890 (+)
G1705671 gns non-coding downstream 10313 9274554 ~ 9275993 (+)
G1705645 NA non-coding downstream 34761 9299002 ~ 9333138 (+)
G1705654 NA non-coding downstream 36546 9300787 ~ 9303687 (+)
G1705279 NA other upstream 250749 9011926 ~ 9013163 (+)
G1705267 NA other upstream 287347 8975304 ~ 8976565 (+)
G1705229 NA other upstream 412805 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 702700 8538928 ~ 8564807 (+)
G1705918 NA other downstream 391057 9655298 ~ 9655718 (+)
G1705920 NA other downstream 395090 9659331 ~ 9660140 (+)
G1706013 NA other downstream 483944 9748185 ~ 9753473 (+)
G1706090 NA other downstream 651472 9915713 ~ 9918019 (+)
G1706152 NA other downstream 870147 10134388 ~ 10135384 (+)

Expression


Co-expression Network