G1705728



Basic Information


Item Value
gene id G1705728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9469313 ~ 9471313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1953348
aatcagaattaggtggtaacataggtaagatgttttatattcatcatatgtttgtaagttacttctcatcagaatgttatttttgtataatactgtggcggggttgcagtatctgttctatgtcaggactaagttgcttgggccgcagagaggggagaggtcaaggtgtcatcatgtgtaaacatatcttttgctccactgtgtctgtgtgccagtcactccctacttttcccatcggggagaggaggatggcagtgtctggaatcattctatgctccctctttTGTTGCTCctatcttaacctatagcctcactctcctctccgtgagtttgtccaggattggttgtatttagaattggttgtatctaaatgacaatttgatatatatcatagggtgggggtaatgtcttggtaccattttgtaccaaggacaaaataagagctttgtttaggagaccaaactgaacgataatttatagccaactcTGTCTGGCTAGGGGATACTCCTCTCTGAAGTAGAGTATtttctttgtgtaagttcctaagacctgtggtttgtcatgtcgtctagggggggtggatctttgctataaaggatccca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1953348 True 603 lncRNA 0.42 2 9469313 9471313

Neighbor


gene id symbol gene type direction distance location
LOC118936575 LOC106592244 coding upstream 56142 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 78271 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 114841 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 227974 9217225 ~ 9241339 (+)
eps8a LOC106594571 coding upstream 377823 8908286 ~ 9091490 (+)
LOC118942866 LOC106576670 coding downstream 60791 9532104 ~ 9722986 (+)
LOC118942867 NA coding downstream 298277 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 353537 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 397089 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 509482 9980795 ~ 9981137 (+)
G1705645 NA non-coding upstream 136175 9299002 ~ 9333138 (+)
G1705650 NA non-coding upstream 147539 9315597 ~ 9321774 (+)
G1705654 NA non-coding upstream 165626 9300787 ~ 9303687 (+)
G1705671 gns non-coding upstream 193320 9274554 ~ 9275993 (+)
G1705863 NA non-coding downstream 50746 9522059 ~ 9529433 (+)
G1705879 NA non-coding downstream 65488 9536801 ~ 9537651 (+)
G1705880 NA non-coding downstream 67936 9539249 ~ 9539450 (+)
G1705884 NA non-coding downstream 76906 9548219 ~ 9548667 (+)
G1705885 NA non-coding downstream 77545 9548858 ~ 9549064 (+)
G1705279 NA other upstream 456150 9011926 ~ 9013163 (+)
G1705267 NA other upstream 492748 8975304 ~ 8976565 (+)
G1705229 NA other upstream 618206 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 908101 8538928 ~ 8564807 (+)
G1705918 NA other downstream 183985 9655298 ~ 9655718 (+)
G1705920 NA other downstream 188018 9659331 ~ 9660140 (+)
G1706013 NA other downstream 276872 9748185 ~ 9753473 (+)
G1706090 NA other downstream 444400 9915713 ~ 9918019 (+)
G1706152 NA other downstream 663075 10134388 ~ 10135384 (+)

Expression



Co-expression Network