G1705880


Basic Information

Item Value
gene id G1705880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9539249 ~ 9539450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953548
tggtttacaggccacatcaggccagCAAGTACACATTACGATGGCTTGCAAATTATGTGCAATTCCTATTGGAAACCAGACAGAATTAGGAAAtccaacaaaaatgtaaaaaaaaagtattaccCACAACCTGAATTCAGcatgactgccagggtaggggaAGGACTGCCGGGGTAGGGGCGAAGGACTGCCGGGGTAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953548 True 202 lncRNA 0.48 1 9539249 9539450

Neighbor

gene id symbol gene type direction distance location
LOC118936575 LOC106592244 coding upstream 126078 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 148207 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 184777 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 297910 9217225 ~ 9241339 (+)
LOC118942859 NA coding upstream 454691 9082796 ~ 9084558 (+)
LOC118942867 NA coding downstream 230140 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 285400 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 328952 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 441345 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 531026 10070476 ~ 10098024 (+)
G1705879 NA non-coding upstream 1598 9536801 ~ 9537651 (+)
G1705863 NA non-coding upstream 9816 9522059 ~ 9529433 (+)
G1705728 NA non-coding upstream 67936 9469313 ~ 9471313 (+)
G1705650 NA non-coding upstream 217475 9315597 ~ 9321774 (+)
G1705884 NA non-coding downstream 8769 9548219 ~ 9548667 (+)
G1705885 NA non-coding downstream 9408 9548858 ~ 9549064 (+)
G1705886 NA non-coding downstream 11097 9550547 ~ 9550791 (+)
G1705889 NA non-coding downstream 23176 9562626 ~ 9562846 (+)
G1705892 NA non-coding downstream 27154 9566604 ~ 9566829 (+)
eps8a LOC106594571 other upstream 447844 8908286 ~ 9091490 (+)
G1705279 NA other upstream 526086 9011926 ~ 9013163 (+)
G1705267 NA other upstream 562684 8975304 ~ 8976565 (+)
G1705229 NA other upstream 688142 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 978037 8538928 ~ 8564807 (+)
G1705918 NA other downstream 115848 9655298 ~ 9655718 (+)
G1705920 NA other downstream 119881 9659331 ~ 9660140 (+)
G1706013 NA other downstream 208735 9748185 ~ 9753473 (+)
G1706090 NA other downstream 376263 9915713 ~ 9918019 (+)
G1706152 NA other downstream 594938 10134388 ~ 10135384 (+)

Expression


Co-expression Network