G1705896


Basic Information

Item Value
gene id G1705896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9580419 ~ 9580681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953566
gtaacatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953566 True 263 lncRNA 0.35 1 9580419 9580681

Neighbor

gene id symbol gene type direction distance location
LOC118936575 LOC106592244 coding upstream 167248 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 189377 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 225947 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 339080 9217225 ~ 9241339 (+)
LOC118942859 NA coding upstream 495861 9082796 ~ 9084558 (+)
LOC118942867 NA coding downstream 188909 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 244169 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 287721 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 400114 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 489795 10070476 ~ 10098024 (+)
G1705893 NA non-coding upstream 12295 9567831 ~ 9568124 (+)
G1705892 NA non-coding upstream 13590 9566604 ~ 9566829 (+)
G1705889 NA non-coding upstream 17573 9562626 ~ 9562846 (+)
G1705886 NA non-coding upstream 29628 9550547 ~ 9550791 (+)
G1705885 NA non-coding upstream 31355 9548858 ~ 9549064 (+)
G1705897 NA non-coding downstream 343 9581024 ~ 9581244 (+)
G1705899 NA non-coding downstream 3819 9584500 ~ 9584718 (+)
G1705900 NA non-coding downstream 5776 9586457 ~ 9586799 (+)
G1705901 NA non-coding downstream 20547 9601228 ~ 9601487 (+)
G1705907 NA non-coding downstream 36637 9617318 ~ 9617734 (+)
eps8a LOC106594571 other upstream 489014 8908286 ~ 9091490 (+)
G1705279 NA other upstream 567256 9011926 ~ 9013163 (+)
G1705267 NA other upstream 603854 8975304 ~ 8976565 (+)
G1705229 NA other upstream 729312 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 1019207 8538928 ~ 8564807 (+)
G1705918 NA other downstream 74617 9655298 ~ 9655718 (+)
G1705920 NA other downstream 78650 9659331 ~ 9660140 (+)
G1706013 NA other downstream 167504 9748185 ~ 9753473 (+)
G1706090 NA other downstream 335032 9915713 ~ 9918019 (+)
G1706152 NA other downstream 553707 10134388 ~ 10135384 (+)

Expression


Co-expression Network