G1705911


Basic Information

Item Value
gene id G1705911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9634547 ~ 9635354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953581
GCCTGACATTCTGAGAGCTCATTGGAGAAATAGGGTTTTTACAGCTCCAGGTCTATTTCTAAATATCTGACTGTATTGATGGGTCTCAGGAGGTTTATGAGAGATGAACTCTGATGTTGTCTGACTGTATTGATGGGTCTCAGGAGGTTTATGAGAGATGAACTCTGATGTTGTCTGACTGTATTGATGGGATGGGTCTCAGGAGGTTTATGAGAGATGAACTCTGATGTTGTCTGACTGTATTGATGGGATGGGTCTCAGGAGGTTTATGAGGGAGGAACTCTGATGTTGTCTGACTGTATTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953581 True 306 lncRNA 0.43 2 9634547 9635354

Neighbor

gene id symbol gene type direction distance location
LOC118936575 LOC106592244 coding upstream 221376 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 243505 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 280075 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 393208 9217225 ~ 9241339 (+)
LOC118942859 NA coding upstream 549989 9082796 ~ 9084558 (+)
LOC118942867 NA coding downstream 134236 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 189496 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 233048 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 345441 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 435122 10070476 ~ 10098024 (+)
G1705908 NA non-coding upstream 8559 9625708 ~ 9625988 (+)
G1705907 NA non-coding upstream 16813 9617318 ~ 9617734 (+)
G1705901 NA non-coding upstream 33060 9601228 ~ 9601487 (+)
G1705900 NA non-coding upstream 47748 9586457 ~ 9586799 (+)
G1705899 NA non-coding upstream 49829 9584500 ~ 9584718 (+)
G1705913 NA non-coding downstream 3335 9638689 ~ 9639293 (+)
G1705917 NA non-coding downstream 19021 9654375 ~ 9654612 (+)
G1705919 NA non-coding downstream 23538 9658892 ~ 9659171 (+)
G1705921 NA non-coding downstream 25157 9660511 ~ 9660789 (+)
G1705922 NA non-coding downstream 29705 9665059 ~ 9665338 (+)
eps8a LOC106594571 other upstream 543142 8908286 ~ 9091490 (+)
G1705279 NA other upstream 621384 9011926 ~ 9013163 (+)
G1705267 NA other upstream 657982 8975304 ~ 8976565 (+)
G1705229 NA other upstream 783440 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 1073335 8538928 ~ 8564807 (+)
G1705918 NA other downstream 19944 9655298 ~ 9655718 (+)
G1705920 NA other downstream 23977 9659331 ~ 9660140 (+)
G1706013 NA other downstream 112831 9748185 ~ 9753473 (+)
G1706090 NA other downstream 280359 9915713 ~ 9918019 (+)
G1706152 NA other downstream 499034 10134388 ~ 10135384 (+)

Expression


Co-expression Network