Gene
RNA
| Item | Value |
|---|---|
| gene id | G1705974 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 9641033 ~ 9641383 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: keratin-associated protein 5-4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1953655 | True | 351 | lncRNA | 0.46 | 1 | 9641033 | 9641383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507938 | LOC106591072 | coding | downstream | 132573 | 9487581 ~ 9508460 (-) |
| LOC110515809 | LOC106592244 | coding | downstream | 160517 | 9464081 ~ 9480516 (-) |
| LOC118936574 | LOC106592244 | coding | downstream | 261158 | 9371753 ~ 9379875 (-) |
| LOC118942865 | LOC106593190 | coding | downstream | 363885 | 9261999 ~ 9277148 (-) |
| LOC110512574 | LOC107758139 | coding | downstream | 436357 | 9111713 ~ 9204676 (-) |
| LOC110510472 | LOC108426397 | coding | upstream | 101455 | 9742838 ~ 9791396 (-) |
| LOC110490693 | il17r | coding | upstream | 234292 | 9875675 ~ 9893829 (-) |
| LOC118936576 | LOC106609822 | coding | upstream | 269699 | 9911082 ~ 9926166 (-) |
| LOC118942869 | arhgef39 | coding | upstream | 315522 | 9956905 ~ 10061152 (-) |
| LOC118942871 | NA | coding | upstream | 486687 | 10128070 ~ 10129253 (-) |
| G1705973 | NA | non-coding | downstream | 107 | 9640500 ~ 9640926 (-) |
| G1705970 | NA | non-coding | downstream | 5679 | 9634569 ~ 9635354 (-) |
| G1705969 | NA | non-coding | downstream | 7859 | 9632892 ~ 9633174 (-) |
| G1705968 | NA | non-coding | downstream | 9821 | 9630905 ~ 9631212 (-) |
| G1705965 | NA | non-coding | downstream | 23331 | 9617339 ~ 9617702 (-) |
| G1705976 | NA | non-coding | upstream | 2630 | 9644013 ~ 9644581 (-) |
| G1705978 | NA | non-coding | upstream | 13977 | 9655360 ~ 9655718 (-) |
| G1705981 | NA | non-coding | upstream | 24284 | 9665667 ~ 9669605 (-) |
| G1705995 | NA | non-coding | upstream | 66526 | 9707909 ~ 9711885 (-) |
| G1705999 | tmem178b | non-coding | upstream | 77725 | 9719108 ~ 9724010 (-) |
| LOC118942864 | NA | other | downstream | 537878 | 9100061 ~ 9104616 (-) |
| LOC118942856 | crbl2 | other | downstream | 832109 | 8805889 ~ 8808961 (-) |
| G1705386 | NA | other | downstream | 1108230 | 8531735 ~ 8532803 (-) |
| G1705975 | NA | other | upstream | 567 | 9641950 ~ 9642941 (-) |
| G1706990 | NA | other | upstream | 719041 | 10360424 ~ 10360975 (-) |
| G1706993 | NA | other | upstream | 726501 | 10367884 ~ 10368439 (-) |
| G1707057 | NA | other | upstream | 889234 | 10530617 ~ 10531271 (-) |
| LOC110499727 | LOC106609821 | other | upstream | 1179541 | 10796557 ~ 10897355 (-) |
